Difference between revisions of "ASPTA"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00281 map00281] == * common_name: ** Geraniol degradation * Synonym(s): == Reaction(s) found == '...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ASPTA ASPTA] == * direction: ** REVERSIBLE * common name: ** Aspartate transaminase * Synonym(s):...")
 
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00281 map00281] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/ASPTA ASPTA] ==
−
* common_name:
+
* direction:
−
** Geraniol degradation
+
** REVERSIBLE
 +
* common name:
 +
** Aspartate transaminase
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
'''3''' reactions found over '''56''' reactions in the full pathway
+
* With identifiers:
−
* [[ECOAH9ir]]
+
** 1.0 [[asp__L]][c] '''+''' 1.0 [[akg]][c] '''<=>''' 1.0 [[glu__L]][c] '''+''' 1.0 [[oaa]][c]
−
** 2 associated gene(s):
+
* With common name(s):
−
*** [[B471_RS0115580]]
+
** 1.0 L-Aspartate[c] '''+''' 1.0 2-Oxoglutarate[c] '''<=>''' 1.0 L-Glutamate[c] '''+''' 1.0 Oxaloacetate[c]
−
*** [[B471_RS0110785]]
+
 
−
** 1 reconstruction source(s) associated:
+
== Genes associated with this reaction  ==
−
*** [[orthology-bsubtilis]]
+
Genes have been associated with this reaction based on different elements listed below.
−
* [[HACD1]]
+
* Gene: [[B471_RS0109180]]
−
** 0 associated gene:
+
** Source: [[orthology-cljungdahlii]]
−
** 1 reconstruction source(s) associated:
+
** Source: [[orthology-bsubtilis]]
−
*** [[manual-reaction_to_add_delete]]
+
** Source: [[orthology-aferrooxidans]]
−
* [[HMGL]]
+
== Pathways  ==
−
** 1 associated gene(s):
+
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
−
*** [[B471_RS0108405]]
+
** '''471''' reactions found over '''2349''' reactions in the full pathway
−
** 1 reconstruction source(s) associated:
+
* [[map00220]]: [http://www.genome.jp/dbget-bin/www_bget?map00220 map00220]
−
*** [[orthology-bsubtilis]]
+
** '''13''' reactions found over '''65''' reactions in the full pathway
−
== Reaction(s) not found ==
+
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
−
* [http://bigg.ucsd.edu/universal/reactions/3HOPCD 3HOPCD]
+
** '''212''' reactions found over '''1054''' reactions in the full pathway
−
* [http://bigg.ucsd.edu/universal/reactions/C2M26DCOAHLm C2M26DCOAHLm]
+
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
−
* [http://bigg.ucsd.edu/universal/reactions/C2M26DCOAHLx C2M26DCOAHLx]
+
** '''101''' reactions found over '''715''' reactions in the full pathway
−
* [http://bigg.ucsd.edu/universal/reactions/DHACOAH DHACOAH]
+
* [[map01210]]: [http://www.genome.jp/dbget-bin/www_bget?map01210 map01210]
−
* [http://bigg.ucsd.edu/universal/reactions/ECH_3hivcoa ECH_3hivcoa]
+
** '''26''' reactions found over '''80''' reactions in the full pathway
−
* [http://bigg.ucsd.edu/universal/reactions/ECOAH11p ECOAH11p]
+
* [[map00270]]: [http://www.genome.jp/dbget-bin/www_bget?map00270 map00270]
−
* [http://bigg.ucsd.edu/universal/reactions/ECOAH12 ECOAH12]
+
** '''24''' reactions found over '''135''' reactions in the full pathway
−
* [http://bigg.ucsd.edu/universal/reactions/ECOAH12m ECOAH12m]
+
* [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200]
−
* [http://bigg.ucsd.edu/universal/reactions/ECOAH9m ECOAH9m]
+
** '''51''' reactions found over '''220''' reactions in the full pathway
−
* [http://bigg.ucsd.edu/universal/reactions/HACD10p HACD10p]
+
* [[map00330]]: [http://www.genome.jp/dbget-bin/www_bget?map00330 map00330]
−
* [http://bigg.ucsd.edu/universal/reactions/HACD1_1 HACD1_1]
+
** '''19''' reactions found over '''149''' reactions in the full pathway
−
* [http://bigg.ucsd.edu/universal/reactions/HACD1i HACD1i]
+
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
−
* [http://bigg.ucsd.edu/universal/reactions/HACD1m HACD1m]
+
** '''78''' reactions found over '''228''' reactions in the full pathway
−
* [http://bigg.ucsd.edu/universal/reactions/HACD1x HACD1x]
+
* [[map00950]]: [http://www.genome.jp/dbget-bin/www_bget?map00950 map00950]
−
* [http://bigg.ucsd.edu/universal/reactions/HACD2 HACD2]
+
** '''2''' reactions found over '''33''' reactions in the full pathway
−
* [http://bigg.ucsd.edu/universal/reactions/HACD2_1 HACD2_1]
+
* [[map00250]]: [http://www.genome.jp/dbget-bin/www_bget?map00250 map00250]
−
* [http://bigg.ucsd.edu/universal/reactions/HACD2i HACD2i]
+
** '''22''' reactions found over '''93''' reactions in the full pathway
−
* [http://bigg.ucsd.edu/universal/reactions/HACD2m HACD2m]
+
* [[map00360]]: [http://www.genome.jp/dbget-bin/www_bget?map00360 map00360]
−
* [http://bigg.ucsd.edu/universal/reactions/HACD3 HACD3]
+
** '''7''' reactions found over '''109''' reactions in the full pathway
−
* [http://bigg.ucsd.edu/universal/reactions/HACD3_1 HACD3_1]
+
* [[map00710]]: [http://www.genome.jp/dbget-bin/www_bget?map00710 map00710]
−
* [http://bigg.ucsd.edu/universal/reactions/HACD3i HACD3i]
+
** '''18''' reactions found over '''71''' reactions in the full pathway
−
* [http://bigg.ucsd.edu/universal/reactions/HACD3m HACD3m]
+
* [[map00350]]: [http://www.genome.jp/dbget-bin/www_bget?map00350 map00350]
−
* [http://bigg.ucsd.edu/universal/reactions/HACD4 HACD4]
+
** '''6''' reactions found over '''102''' reactions in the full pathway
−
* [http://bigg.ucsd.edu/universal/reactions/HACD4i HACD4i]
+
* [[map00960]]: [http://www.genome.jp/dbget-bin/www_bget?map00960 map00960]
−
* [http://bigg.ucsd.edu/universal/reactions/HACD4m HACD4m]
+
** '''4''' reactions found over '''27''' reactions in the full pathway
−
* [http://bigg.ucsd.edu/universal/reactions/HACD4p HACD4p]
+
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
−
* [http://bigg.ucsd.edu/universal/reactions/HACD5 HACD5]
+
** '''148''' reactions found over '''694''' reactions in the full pathway
−
* [http://bigg.ucsd.edu/universal/reactions/HACD5i HACD5i]
+
* [[map00400]]: [http://www.genome.jp/dbget-bin/www_bget?map00400 map00400]
−
* [http://bigg.ucsd.edu/universal/reactions/HACD5m HACD5m]
+
** '''17''' reactions found over '''59''' reactions in the full pathway
−
* [http://bigg.ucsd.edu/universal/reactions/HACD5p HACD5p]
+
* [[map00401]]: [http://www.genome.jp/dbget-bin/www_bget?map00401 map00401]
−
* [http://bigg.ucsd.edu/universal/reactions/HACD6 HACD6]
+
** '''3''' reactions found over '''17''' reactions in the full pathway
−
* [http://bigg.ucsd.edu/universal/reactions/HACD6i HACD6i]
+
== Reconstruction information  ==
−
* [http://bigg.ucsd.edu/universal/reactions/HACD6m HACD6m]
+
* Category: [[orthology]]
−
* [http://bigg.ucsd.edu/universal/reactions/HACD6p HACD6p]
+
** Source: [[orthology-cljungdahlii]]
−
* [http://bigg.ucsd.edu/universal/reactions/HACD7 HACD7]
+
*** Tool: [[pantograph]]
−
* [http://bigg.ucsd.edu/universal/reactions/HACD7i HACD7i]
+
** Source: [[orthology-bsubtilis]]
−
* [http://bigg.ucsd.edu/universal/reactions/HACD7m HACD7m]
+
*** Tool: [[pantograph]]
−
* [http://bigg.ucsd.edu/universal/reactions/HACD7p HACD7p]
+
** Source: [[orthology-aferrooxidans]]
−
* [http://bigg.ucsd.edu/universal/reactions/HACD9 HACD9]
+
*** Tool: [[pantograph]]
−
* [http://bigg.ucsd.edu/universal/reactions/HACD9m HACD9m]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HACDp HACDp]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HADPCOADH3 HADPCOADH3]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HBCO_nadp HBCO_nadp]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HBCO_nadp_m HBCO_nadp_m]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HIBDkt HIBDkt]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HMGL_1 HMGL_1]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HMGLm HMGLm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HMGLx HMGLx]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HMNO HMNO]
+
−
* [http://bigg.ucsd.edu/universal/reactions/KATp KATp]
+
−
* [http://bigg.ucsd.edu/universal/reactions/OGCOAAT OGCOAAT]
+
−
* [http://bigg.ucsd.edu/universal/reactions/T2M26DCOAHLm T2M26DCOAHLm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/T2M26DCOAHLx T2M26DCOAHLx]
+
 
== External links  ==
 
== External links  ==
−
{{#set: common_name=Geraniol degradation}}
+
* EC Number : 2.6.1.1
−
{{#set: reaction found=3}}
+
* BioCyc : META:ASPAMINOTRANS-RXN
−
{{#set: total reaction=56}}
+
* MetaNetX (MNX) Equation : MNXR96079
−
{{#set: completion rate=5.0}}
+
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21824 21824]
 +
* Reactome : REACT_R-ATH-70596
 +
* KEGG Reaction : R00355
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=Aspartate transaminase}}
 +
{{#set: gene associated=B471_RS0109180}}
 +
{{#set: in pathway=map01100|map00220|map01110|map01120|map01210|map00270|map01200|map00330|map01230|map00950|map00250|map00360|map00710|map00350|map00960|map01130|map00400|map00401}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-cljungdahlii|orthology-bsubtilis|orthology-aferrooxidans}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:37, 21 March 2018

Reaction ASPTA

  • direction:
    • REVERSIBLE
  • common name:
    • Aspartate transaminase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 L-Aspartate[c] + 1.0 2-Oxoglutarate[c] <=> 1.0 L-Glutamate[c] + 1.0 Oxaloacetate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • EC Number : 2.6.1.1
  • BioCyc : META:ASPAMINOTRANS-RXN
  • MetaNetX (MNX) Equation : MNXR96079
  • RHEA:
  • Reactome : REACT_R-ATH-70596
  • KEGG Reaction : R00355




Retrieved from "http://gem-aureme.irisa.fr/cutigem/index.php?title=ASPTA&oldid=7469"