Difference between revisions of "PSD180"

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(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00550 map00550] == * common_name: ** Peptidoglycan biosynthesis * Synonym(s): == Reaction(s) found...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PSD180 PSD180] == * direction: ** LEFT-TO-RIGHT * common name: ** Phosphatidylserine decarboxylase...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00550 map00550] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/PSD180 PSD180] ==
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* common_name:
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* direction:
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** Peptidoglycan biosynthesis
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** LEFT-TO-RIGHT
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* common name:
 +
** Phosphatidylserine decarboxylase (n-C18:0)
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''14''' reactions found over '''27''' reactions in the full pathway
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* With identifiers:
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* [[ALAALAr]]
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** 1.0 [[h]][c] '''+''' 1.0 [[ps180]][c] '''=>''' 1.0 [[co2]][c] '''+''' 1.0 [[pe180]][c]
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** 1 associated gene(s):
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* With common name(s):
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*** [[B471_RS0112130]]
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** 1.0 H+[c] '''+''' 1.0 Phosphatidylserine (dioctadecanoyl, n-C18:0)[c] '''=>''' 1.0 CO2 CO2[c] '''+''' 1.0 Phosphatidylethanolamine (dioctadecanoyl, n-C18:0)[c]
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** 3 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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== Genes associated with this reaction  ==
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*** [[orthology-bsubtilis]]
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== Pathways  ==
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*** [[orthology-aferrooxidans]]
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
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* [[MDDCP1ex]]
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** '''471''' reactions found over '''2349''' reactions in the full pathway
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** 1 associated gene(s):
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* [[map00564]]: [http://www.genome.jp/dbget-bin/www_bget?map00564 map00564]
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*** [[B471_RS0101180]]
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** '''36''' reactions found over '''134''' reactions in the full pathway
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** 1 reconstruction source(s) associated:
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* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
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*** [[orthology-cljungdahlii]]
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** '''212''' reactions found over '''1054''' reactions in the full pathway
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* [[MDDCP2ex]]
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== Reconstruction information  ==
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** 1 associated gene(s):
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* Category: [[manual]]
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*** [[B471_RS0101180]]
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** Source: [[manual-reaction_to_add_delete]]
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** 1 reconstruction source(s) associated:
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*** Comment: [[reaction added from literature evidence or biological expertise]]
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*** [[orthology-cljungdahlii]]
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* [[MDDCP3ex]]
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** 1 associated gene(s):
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*** [[B471_RS0101180]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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* [[MDDCP4ex]]
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** 1 associated gene(s):
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*** [[B471_RS0101180]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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* [[MDDCP5ex]]
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** 1 associated gene(s):
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*** [[B471_RS0101180]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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* [[PAPPT3]]
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** 1 associated gene(s):
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*** [[B471_RS0108980]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[UAAGDS]]
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** 2 associated gene(s):
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*** [[B471_RS0102460]]
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*** [[B471_RS0108970]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[UAGCVT]]
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** 1 associated gene(s):
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*** [[B471_RS0105355]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[UAGPT3]]
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** 2 associated gene(s):
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*** [[B471_RS0108585]]
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*** [[B471_RS0108990]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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* [[UAMAGS]]
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** 1 associated gene(s):
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*** [[B471_RS0109185]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[UAMAS]]
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** 1 associated gene(s):
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*** [[B471_RS0105365]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[UAPGR]]
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** 1 associated gene(s):
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*** [[B471_RS0108995]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[UGMDDS]]
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** 1 associated gene(s):
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*** [[B471_RS21735]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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== Reaction(s) not found ==
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* [http://bigg.ucsd.edu/universal/reactions/MDDCP1pp MDDCP1pp]
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* [http://bigg.ucsd.edu/universal/reactions/MDDCP2pp MDDCP2pp]
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* [http://bigg.ucsd.edu/universal/reactions/MDDCP3pp MDDCP3pp]
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* [http://bigg.ucsd.edu/universal/reactions/MDDCP4pp MDDCP4pp]
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* [http://bigg.ucsd.edu/universal/reactions/MDDCP5pp MDDCP5pp]
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* [http://bigg.ucsd.edu/universal/reactions/PAPPT1 PAPPT1]
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* [http://bigg.ucsd.edu/universal/reactions/PAPPT2 PAPPT2]
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* [http://bigg.ucsd.edu/universal/reactions/UAAGLS1 UAAGLS1]
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* [http://bigg.ucsd.edu/universal/reactions/UAAGLS2 UAAGLS2]
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* [http://bigg.ucsd.edu/universal/reactions/UAGPT1 UAGPT1]
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* [http://bigg.ucsd.edu/universal/reactions/UAGPT2 UAGPT2]
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* [http://bigg.ucsd.edu/universal/reactions/UGLDDS1 UGLDDS1]
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* [http://bigg.ucsd.edu/universal/reactions/UGLDDS2 UGLDDS2]
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== External links  ==
 
== External links  ==
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{{#set: common_name=Peptidoglycan biosynthesis}}
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* MetaNetX (MNX) Equation : MNXR103234
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{{#set: reaction found=14}}
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* EC Number : 4.1.1.65
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{{#set: total reaction=27}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: completion rate=52.0}}
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{{#set: common name=Phosphatidylserine decarboxylase (n-C18:0)}}
 +
{{#set: in pathway=map01100|map00564|map01110}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=manual-reaction_to_add_delete}}
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{{#set: reconstruction comment=reaction added from literature evidence or biological expertise}}

Latest revision as of 15:38, 21 March 2018

Reaction PSD180

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Phosphatidylserine decarboxylase (n-C18:0)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 H+[c] + 1.0 Phosphatidylserine (dioctadecanoyl, n-C18:0)[c] => 1.0 CO2 CO2[c] + 1.0 Phosphatidylethanolamine (dioctadecanoyl, n-C18:0)[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR103234
  • EC Number : 4.1.1.65




Retrieved from "http://gem-aureme.irisa.fr/cutigem/index.php?title=PSD180&oldid=7514"