Difference between revisions of "GND"

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(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/akg akg] == * common name: ** 2-Oxoglutarate * Synonym(s): == Reaction(s) known to consume t...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GND GND] == * direction: ** LEFT-TO-RIGHT * common name: ** Phosphogluconate dehydrogenase * Synony...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
== Metabolite [http://bigg.ucsd.edu/universal/metabolites/akg akg] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/GND GND] ==
 +
* direction:
 +
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** 2-Oxoglutarate
+
** Phosphogluconate dehydrogenase
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
* [[ABTA]]
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* With identifiers:
* [[OXGDC]]
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** 1.0 [[nadp]][c] '''+''' 1.0 [[6pgc]][c] '''=>''' 1.0 [[nadph]][c] '''+''' 1.0 [[ru5p__D]][c] '''+''' 1.0 [[co2]][c]
* [[AKGt2r_CUT]]
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* With common name(s):
* [[GLUSy]]
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** 1.0 Nicotinamide adenine dinucleotide phosphate[c] '''+''' 1.0 6-Phospho-D-gluconate[c] '''=>''' 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c] '''+''' 1.0 D-Ribulose 5-phosphate[c] '''+''' 1.0 CO2 CO2[c]
* [[ORNTA_CUT]]
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* [[PTRCTA]]
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== Genes associated with this reaction  ==
== Reaction(s) known to produce the compound ==
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Genes have been associated with this reaction based on different elements listed below.
* [[GLUDxi_CUT]]
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* Gene: [[B471_RS0108280]]
* [[PSERT]]
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** Source: [[orthology-cljungdahlii]]
* [[HSTPT]]
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* Gene: [[B471_RS0107325]]
* [[UACGAMOAT_CUT]]
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** Source: [[orthology-cljungdahlii]]
* [[AKGt2r_CUT]]
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== Pathways  ==
== Reaction(s) of unknown directionality ==
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
* [[ICDHyr]]
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** '''471''' reactions found over '''2349''' reactions in the full pathway
* [[LEUTA]]
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* [[map00480]]: [http://www.genome.jp/dbget-bin/www_bget?map00480 map00480]
* [[GLUDy]]
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** '''10''' reactions found over '''39''' reactions in the full pathway
* [[SDPTA]]
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* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
* [[OOR2r_CUT]]
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** '''212''' reactions found over '''1054''' reactions in the full pathway
* [[TYRTA]]
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* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
* [[ACOTA]]
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** '''101''' reactions found over '''715''' reactions in the full pathway
* [[ILETA]]
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* [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200]
* [[VALTA]]
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** '''51''' reactions found over '''220''' reactions in the full pathway
* [[ASPTA]]
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* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
* [[2S6HCCi]]
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** '''148''' reactions found over '''694''' reactions in the full pathway
* [[PHETA1]]
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* [[map00030]]: [http://www.genome.jp/dbget-bin/www_bget?map00030 map00030]
 +
** '''20''' reactions found over '''69''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-cljungdahlii]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
{{#set: common name=2-Oxoglutarate}}
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* EC Number : 1.1.1.351
{{#set: consumed by=ABTA|OXGDC|AKGt2r_CUT|GLUSy|ORNTA_CUT|PTRCTA}}
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* BioCyc : META:RXN-9952
{{#set: produced by=GLUDxi_CUT|PSERT|HSTPT|UACGAMOAT_CUT|AKGt2r_CUT}}
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* MetaNetX (MNX) Equation : MNXR100389
{{#set: reversible reaction associated=ICDHyr|LEUTA|GLUDy|SDPTA|OOR2r_CUT|TYRTA|ACOTA|ILETA|VALTA|ASPTA|2S6HCCi|PHETA1}}
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* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10116 10116]
 +
* Reactome : REACT_R-ATH-71299
 +
* KEGG Reaction : R01528
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=Phosphogluconate dehydrogenase}}
 +
{{#set: gene associated=B471_RS0108280|B471_RS0107325}}
 +
{{#set: in pathway=map01100|map00480|map01110|map01120|map01200|map01130|map00030}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-cljungdahlii}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:40, 21 March 2018

Reaction GND

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Phosphogluconate dehydrogenase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Nicotinamide adenine dinucleotide phosphate[c] + 1.0 6-Phospho-D-gluconate[c] => 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c] + 1.0 D-Ribulose 5-phosphate[c] + 1.0 CO2 CO2[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • EC Number : 1.1.1.351
  • BioCyc : META:RXN-9952
  • MetaNetX (MNX) Equation : MNXR100389
  • RHEA:
  • Reactome : REACT_R-ATH-71299
  • KEGG Reaction : R01528