Difference between revisions of "TRPS1"
From metabolic_network
(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/ser__D ser__D] == * common name: ** D-Serine * Synonym(s): == Reaction(s) known to consume t...") |
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/TRPS1 TRPS1] == * direction: ** LEFT-TO-RIGHT * common name: ** Tryptophan synthase (indoleglycerol...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://bigg.ucsd.edu/universal/reactions/TRPS1 TRPS1] == |
| + | * direction: | ||
| + | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
| − | ** | + | ** Tryptophan synthase (indoleglycerol phosphate) |
* Synonym(s): | * Synonym(s): | ||
| − | == Reaction(s) | + | == Reaction Formula == |
| − | * [[ | + | * With identifiers: |
| − | * [[ | + | ** 1.0 [[3ig3p]][c] '''+''' 1.0 [[ser__L]][c] '''=>''' 1.0 [[trp__L]][c] '''+''' 1.0 [[h2o]][c] '''+''' 1.0 [[g3p]][c] |
| − | == | + | * With common name(s): |
| − | * [[ | + | ** 1.0 C'-(3-Indolyl)-glycerol 3-phosphate[c] '''+''' 1.0 L-Serine[c] '''=>''' 1.0 L-Tryptophan[c] '''+''' 1.0 H2O H2O[c] '''+''' 1.0 Glyceraldehyde 3-phosphate[c] |
| − | == | + | |
| + | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[B471_RS0109425]] | ||
| + | ** Source: [[orthology-cljungdahlii]] | ||
| + | ** Source: [[orthology-bsubtilis]] | ||
| + | * Gene: [[B471_RS0109430]] | ||
| + | ** Source: [[orthology-cljungdahlii]] | ||
| + | ** Source: [[orthology-bsubtilis]] | ||
| + | == Pathways == | ||
| + | * [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100] | ||
| + | ** '''471''' reactions found over '''2349''' reactions in the full pathway | ||
| + | * [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110] | ||
| + | ** '''212''' reactions found over '''1054''' reactions in the full pathway | ||
| + | * [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230] | ||
| + | ** '''78''' reactions found over '''228''' reactions in the full pathway | ||
| + | * [[map00260]]: [http://www.genome.jp/dbget-bin/www_bget?map00260 map00260] | ||
| + | ** '''24''' reactions found over '''133''' reactions in the full pathway | ||
| + | * [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130] | ||
| + | ** '''148''' reactions found over '''694''' reactions in the full pathway | ||
| + | * [[map00400]]: [http://www.genome.jp/dbget-bin/www_bget?map00400 map00400] | ||
| + | ** '''17''' reactions found over '''59''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-cljungdahlii]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-bsubtilis]] | ||
| + | *** Tool: [[pantograph]] | ||
== External links == | == External links == | ||
| − | {{#set: common name= | + | * RHEA: |
| − | {{#set: | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10532 10532] |
| − | {{#set: | + | * EC Number : 4.2.1.20 |
| + | * MetaNetX (MNX) Equation : MNXR104343 | ||
| + | * KEGG Reaction : R02722 | ||
| + | * BioCyc : META:TRYPSYN-RXN | ||
| + | {{#set: direction=LEFT-TO-RIGHT}} | ||
| + | {{#set: common name=Tryptophan synthase (indoleglycerol phosphate)}} | ||
| + | {{#set: gene associated=B471_RS0109425|B471_RS0109430}} | ||
| + | {{#set: in pathway=map01100|map01110|map01230|map00260|map01130|map00400}} | ||
| + | {{#set: reconstruction category=orthology}} | ||
| + | {{#set: reconstruction source=orthology-cljungdahlii|orthology-bsubtilis}} | ||
| + | {{#set: reconstruction tool=pantograph}} | ||
Latest revision as of 15:46, 21 March 2018
Contents
Reaction TRPS1
- direction:
- LEFT-TO-RIGHT
- common name:
- Tryptophan synthase (indoleglycerol phosphate)
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1.0 C'-(3-Indolyl)-glycerol 3-phosphate[c] + 1.0 L-Serine[c] => 1.0 L-Tryptophan[c] + 1.0 H2O H2O[c] + 1.0 Glyceraldehyde 3-phosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: B471_RS0109425
- Source: orthology-cljungdahlii
- Source: orthology-bsubtilis
- Gene: B471_RS0109430
- Source: orthology-cljungdahlii
- Source: orthology-bsubtilis
Pathways
- map01100: map01100
- 471 reactions found over 2349 reactions in the full pathway
- map01110: map01110
- 212 reactions found over 1054 reactions in the full pathway
- map01230: map01230
- 78 reactions found over 228 reactions in the full pathway
- map00260: map00260
- 24 reactions found over 133 reactions in the full pathway
- map01130: map01130
- 148 reactions found over 694 reactions in the full pathway
- map00400: map00400
- 17 reactions found over 59 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-cljungdahlii
- Tool: pantograph
- Source: orthology-bsubtilis
- Tool: pantograph
- Source: orthology-cljungdahlii
External links
- RHEA:
- EC Number : 4.2.1.20
- MetaNetX (MNX) Equation : MNXR104343
- KEGG Reaction : R02722
- BioCyc : META:TRYPSYN-RXN
