Difference between revisions of "SPMS"
From metabolic_network
(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/uamag uamag] == * common name: ** UDP-N-acetylmuramoyl-L-alanyl-D-glutamate * Synonym(s): ==...") |
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/SPMS SPMS] == * direction: ** LEFT-TO-RIGHT * common name: ** Spermidine synthase * Synonym(s): ==...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://bigg.ucsd.edu/universal/reactions/SPMS SPMS] == |
| + | * direction: | ||
| + | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
| − | ** | + | ** Spermidine synthase |
* Synonym(s): | * Synonym(s): | ||
| − | == Reaction(s) | + | == Reaction Formula == |
| − | * [[ | + | * With identifiers: |
| − | == | + | ** 1.0 [[ptrc]][c] '''+''' 1.0 [[ametam]][c] '''=>''' 1.0 [[h]][c] '''+''' 1.0 [[5mta]][c] '''+''' 1.0 [[spmd]][c] |
| − | * [[ | + | * With common name(s): |
| − | == | + | ** 1.0 Putrescine[c] '''+''' 1.0 S-Adenosylmethioninamine[c] '''=>''' 1.0 H+[c] '''+''' 1.0 5-Methylthioadenosine[c] '''+''' 1.0 Spermidine[c] |
| + | |||
| + | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[B471_RS0113665]] | ||
| + | ** Source: [[orthology-cljungdahlii]] | ||
| + | ** Source: [[orthology-bsubtilis]] | ||
| + | == Pathways == | ||
| + | * [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100] | ||
| + | ** '''471''' reactions found over '''2349''' reactions in the full pathway | ||
| + | * [[map00270]]: [http://www.genome.jp/dbget-bin/www_bget?map00270 map00270] | ||
| + | ** '''24''' reactions found over '''135''' reactions in the full pathway | ||
| + | * [[map00480]]: [http://www.genome.jp/dbget-bin/www_bget?map00480 map00480] | ||
| + | ** '''10''' reactions found over '''39''' reactions in the full pathway | ||
| + | * [[map00330]]: [http://www.genome.jp/dbget-bin/www_bget?map00330 map00330] | ||
| + | ** '''19''' reactions found over '''149''' reactions in the full pathway | ||
| + | * [[map00410]]: [http://www.genome.jp/dbget-bin/www_bget?map00410 map00410] | ||
| + | ** '''9''' reactions found over '''91''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-cljungdahlii]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-bsubtilis]] | ||
| + | *** Tool: [[pantograph]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | * RHEA: |
| − | {{#set: | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12721 12721] |
| − | {{#set: | + | * EC Number : 2.5.1.16 |
| + | * MetaNetX (MNX) Equation : MNXR95860 | ||
| + | * KEGG Reaction : R01920 | ||
| + | * BioCyc : META:SPERMIDINESYN-RXN | ||
| + | {{#set: direction=LEFT-TO-RIGHT}} | ||
| + | {{#set: common name=Spermidine synthase}} | ||
| + | {{#set: gene associated=B471_RS0113665}} | ||
| + | {{#set: in pathway=map01100|map00270|map00480|map00330|map00410}} | ||
| + | {{#set: reconstruction category=orthology}} | ||
| + | {{#set: reconstruction source=orthology-cljungdahlii|orthology-bsubtilis}} | ||
| + | {{#set: reconstruction tool=pantograph}} | ||
Latest revision as of 15:47, 21 March 2018
Contents
Reaction SPMS
- direction:
- LEFT-TO-RIGHT
- common name:
- Spermidine synthase
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1.0 Putrescine[c] + 1.0 S-Adenosylmethioninamine[c] => 1.0 H+[c] + 1.0 5-Methylthioadenosine[c] + 1.0 Spermidine[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: B471_RS0113665
- Source: orthology-cljungdahlii
- Source: orthology-bsubtilis
Pathways
- map01100: map01100
- 471 reactions found over 2349 reactions in the full pathway
- map00270: map00270
- 24 reactions found over 135 reactions in the full pathway
- map00480: map00480
- 10 reactions found over 39 reactions in the full pathway
- map00330: map00330
- 19 reactions found over 149 reactions in the full pathway
- map00410: map00410
- 9 reactions found over 91 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-cljungdahlii
- Tool: pantograph
- Source: orthology-bsubtilis
- Tool: pantograph
- Source: orthology-cljungdahlii
External links
- RHEA:
- EC Number : 2.5.1.16
- MetaNetX (MNX) Equation : MNXR95860
- KEGG Reaction : R01920
- BioCyc : META:SPERMIDINESYN-RXN
