Difference between revisions of "Lac D"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PC PC] == * direction: ** LEFT-TO-RIGHT * common name: ** Pyruvate carboxylase * Synonym(s): == Re...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/UPP3MT2_AFE UPP3MT2_AFE] == * direction: ** REVERSIBLE * common name: ** uroporphyrinogen methyltra...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/PC PC] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/UPP3MT2_AFE UPP3MT2_AFE] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** Pyruvate carboxylase
+
** uroporphyrinogen methyltransferase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[pyr]][c] '''+''' 1.0 [[atp]][c] '''+''' 1.0 [[hco3]][c] '''=>''' 1.0 [[adp]][c] '''+''' 1.0 [[oaa]][c] '''+''' 1.0 [[pi]][c] '''+''' 1.0 [[h]][c]
+
** 1.0 [[uppg3]][c] '''+''' 1.0 [[amet]][c] '''<=>''' 1.0 [[h]][c] '''+''' 1.0 [[ahcys]][c] '''+''' 1.0 [[pre1]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 Pyruvate[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 Bicarbonate[c] '''=>''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 Oxaloacetate[c] '''+''' 1.0 Phosphate[c] '''+''' 1.0 H+[c]
+
** 1.0 Uroporphyrinogen III[c] '''+''' 1.0 S-Adenosyl-L-methionine[c] '''<=>''' 1.0 H+[c] '''+''' 1.0 S-Adenosyl-L-homocysteine[c] '''+''' 1.0 Precorrin_1[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[B471_RS0103275]]
+
* [[B471_RS24115]]
−
** [[pantograph]]-[[cljungdahlii]]
+
** [[pantograph]]-[[aferrooxidans]]
−
** [[pantograph]]-[[bsubtilis]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
−
** '''472''' reactions found over '''2349''' reactions in the full pathway
 
−
* [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200]
 
−
** '''51''' reactions found over '''220''' reactions in the full pathway
 
−
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 
−
** '''101''' reactions found over '''715''' reactions in the full pathway
 
−
* [[map00720]]: [http://www.genome.jp/dbget-bin/www_bget?map00720 map00720]
 
−
** '''25''' reactions found over '''157''' reactions in the full pathway
 
−
* [[map00620]]: [http://www.genome.jp/dbget-bin/www_bget?map00620 map00620]
 
−
** '''22''' reactions found over '''163''' reactions in the full pathway
 
−
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
 
−
** '''78''' reactions found over '''228''' reactions in the full pathway
 
−
* [[map00020]]: [http://www.genome.jp/dbget-bin/www_bget?map00020 map00020]
 
−
** '''10''' reactions found over '''70''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-aferrooxidans]]
−
*** [[cljungdahlii]]
+
*** Tool: [[pantograph]]
−
*** [[bsubtilis]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=REVERSIBLE}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20844 20844]
+
{{#set: common name=uroporphyrinogen methyltransferase}}
−
* BioCyc : META:PYRUVATE-CARBOXYLASE-RXN
+
{{#set: gene associated=B471_RS24115}}
−
* MetaNetX (MNX) Equation : MNXR102391
+
{{#set: in pathway=}}
−
* KEGG Reaction : R00344
+
−
* EC Number : 6.4.1.1
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=Pyruvate carboxylase}}
+
−
{{#set: gene associated=B471_RS0103275}}
+
−
{{#set: in pathway=map01100|map01200|map01120|map00720|map00620|map01230|map00020}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-aferrooxidans}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=cljungdahlii|bsubtilis}}
 

Revision as of 23:36, 20 March 2018

Reaction UPP3MT2_AFE

  • direction:
    • REVERSIBLE
  • common name:
    • uroporphyrinogen methyltransferase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Uroporphyrinogen III[c] + 1.0 S-Adenosyl-L-methionine[c] <=> 1.0 H+[c] + 1.0 S-Adenosyl-L-homocysteine[c] + 1.0 Precorrin_1[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/cutigem/index.php?title=Lac_D&oldid=3695"