Difference between revisions of "Pheme"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/NTD1 NTD1] == * direction: ** LEFT-TO-RIGHT * common name: ** 5'-nucleotidase (dUMP) * Synonym(s):...") |
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/UREA UREA] == * direction: ** LEFT-TO-RIGHT * common name: ** Urease * Synonym(s): == Reaction For...") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://bigg.ucsd.edu/universal/reactions/ | + | == Reaction [http://bigg.ucsd.edu/universal/reactions/UREA UREA] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
| − | ** | + | ** Urease |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1.0 [[ | + | ** 1.0 [[urea]][c] '''+''' 2.0 [[h]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[co2]][c] '''+''' 2.0 [[nh4]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1.0 | + | ** 1.0 Urea CH4N2O[c] '''+''' 2.0 H+[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 CO2 CO2[c] '''+''' 2.0 Ammonium[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[ | + | * [[B471_RS0116215]] |
| + | ** [[pantograph]]-[[bsubtilis]] | ||
| + | * [[B471_RS0116220]] | ||
| + | ** [[pantograph]]-[[bsubtilis]] | ||
| + | * [[B471_RS0116225]] | ||
** [[pantograph]]-[[bsubtilis]] | ** [[pantograph]]-[[bsubtilis]] | ||
== Pathways == | == Pathways == | ||
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100] | * [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100] | ||
| − | ** ''' | + | ** '''471''' reactions found over '''2349''' reactions in the full pathway |
| − | * [[ | + | * [[map00220]]: [http://www.genome.jp/dbget-bin/www_bget?map00220 map00220] |
| − | ** ''' | + | ** '''13''' reactions found over '''65''' reactions in the full pathway |
| + | * [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230] | ||
| + | ** '''64''' reactions found over '''298''' reactions in the full pathway | ||
| + | * [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120] | ||
| + | ** '''101''' reactions found over '''715''' reactions in the full pathway | ||
| + | * [[map00791]]: [http://www.genome.jp/dbget-bin/www_bget?map00791 map00791] | ||
| + | ** '''1''' reactions found over '''7''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * [[orthology]] | + | * Category: [[orthology]] |
| − | ** [[ | + | ** Source: [[orthology-bsubtilis]] |
| − | *** [[ | + | *** Tool: [[pantograph]] |
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20557 20557] |
| − | * | + | * EC Number : 3.5.1.5 |
| − | * MetaNetX (MNX) Equation : | + | * MetaNetX (MNX) Equation : MNXR105153 |
| − | * KEGG Reaction : | + | * KEGG Reaction : R00131 |
| − | * | + | * BioCyc : META:UREASE-RXN |
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | {{#set: common name= | + | {{#set: common name=Urease}} |
| − | {{#set: gene associated= | + | {{#set: gene associated=B471_RS0116215|B471_RS0116220|B471_RS0116225}} |
| − | {{#set: in pathway=map01100| | + | {{#set: in pathway=map01100|map00220|map00230|map01120|map00791}} |
{{#set: reconstruction category=orthology}} | {{#set: reconstruction category=orthology}} | ||
| + | {{#set: reconstruction source=orthology-bsubtilis}} | ||
{{#set: reconstruction tool=pantograph}} | {{#set: reconstruction tool=pantograph}} | ||
| − | |||
Revision as of 23:36, 20 March 2018
Contents
Reaction UREA
- direction:
- LEFT-TO-RIGHT
- common name:
- Urease
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1.0 Urea CH4N2O[c] + 2.0 H+[c] + 1.0 H2O H2O[c] => 1.0 CO2 CO2[c] + 2.0 Ammonium[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
Pathways
- map01100: map01100
- 471 reactions found over 2349 reactions in the full pathway
- map00220: map00220
- 13 reactions found over 65 reactions in the full pathway
- map00230: map00230
- 64 reactions found over 298 reactions in the full pathway
- map01120: map01120
- 101 reactions found over 715 reactions in the full pathway
- map00791: map00791
- 1 reactions found over 7 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-bsubtilis
- Tool: pantograph
- Source: orthology-bsubtilis
External links
- RHEA:
- EC Number : 3.5.1.5
- MetaNetX (MNX) Equation : MNXR105153
- KEGG Reaction : R00131
- BioCyc : META:UREASE-RXN
