Difference between revisions of "Trdca"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/3OAR161 3OAR161] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxoacyl-[acyl-carrier-protein...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/DHAD1 DHAD1] == * direction: ** LEFT-TO-RIGHT * common name: ** Dihydroxy-acid dehydratase (2,3-dih...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/3OAR161 3OAR161] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/DHAD1 DHAD1] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** 3-oxoacyl-[acyl-carrier-protein] reductase (n-C16:1)
+
** Dihydroxy-acid dehydratase (2,3-dihydroxy-3-methylbutanoate)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[h]][c] '''+''' 1.0 [[nadph]][c] '''+''' 1.0 [[3ocpalm9eACP]][c] '''=>''' 1.0 [[nadp]][c] '''+''' 1.0 [[3hcpalm9eACP]][c]
+
** 1.0 [[23dhmb]][c] '''=>''' 1.0 [[3mob]][c] '''+''' 1.0 [[h2o]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 H+[c] '''+''' 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c] '''+''' 1.0 3-oxo-cis-palm-9-eoyl-[acyl-carrier protein][c] '''=>''' 1.0 Nicotinamide adenine dinucleotide phosphate[c] '''+''' 1.0 (R)-3-hydroxy-cis-palm-9-eoyl-[acyl-carrier protein][c]
+
** 1.0 (R)-2,3-Dihydroxy-3-methylbutanoate[c] '''=>''' 1.0 3-Methyl-2-oxobutanoate[c] '''+''' 1.0 H2O H2O[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[B471_RS0109640]]
+
* [[B471_RS0117830]]
 
** [[pantograph]]-[[cljungdahlii]]
 
** [[pantograph]]-[[cljungdahlii]]
 +
** [[pantograph]]-[[bsubtilis]]
 
== Pathways  ==
 
== Pathways  ==
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
−
** '''472''' reactions found over '''2349''' reactions in the full pathway
+
** '''471''' reactions found over '''2349''' reactions in the full pathway
−
* [[map00780]]: [http://www.genome.jp/dbget-bin/www_bget?map00780 map00780]
+
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
−
** '''28''' reactions found over '''67''' reactions in the full pathway
+
** '''212''' reactions found over '''1054''' reactions in the full pathway
−
* [[map00061]]: [http://www.genome.jp/dbget-bin/www_bget?map00061 map00061]
+
* [[map00770]]: [http://www.genome.jp/dbget-bin/www_bget?map00770 map00770]
−
** '''54''' reactions found over '''160''' reactions in the full pathway
+
** '''20''' reactions found over '''75''' reactions in the full pathway
−
* [[map01040]]: [http://www.genome.jp/dbget-bin/www_bget?map01040 map01040]
+
* [[map00290]]: [http://www.genome.jp/dbget-bin/www_bget?map00290 map00290]
−
** '''7''' reactions found over '''42''' reactions in the full pathway
+
** '''15''' reactions found over '''49''' reactions in the full pathway
 +
* [[map01210]]: [http://www.genome.jp/dbget-bin/www_bget?map01210 map01210]
 +
** '''26''' reactions found over '''80''' reactions in the full pathway
 +
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
 +
** '''78''' reactions found over '''228''' reactions in the full pathway
 +
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 +
** '''148''' reactions found over '''694''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-cljungdahlii]]
−
*** [[cljungdahlii]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-bsubtilis]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* MetaNetX (MNX) Equation : MNXR94947
+
* RHEA:
−
* EC Number : 1.1.1.100
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24809 24809]
 +
* EC Number : 4.2.1.9
 +
* MetaNetX (MNX) Equation : MNXR97358
 +
* KEGG Reaction : R04441
 +
* BioCyc : META:DIHYDROXYISOVALDEHYDRAT-RXN
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=3-oxoacyl-[acyl-carrier-protein] reductase (n-C16:1)}}
+
{{#set: common name=Dihydroxy-acid dehydratase (2,3-dihydroxy-3-methylbutanoate)}}
−
{{#set: gene associated=B471_RS0109640}}
+
{{#set: gene associated=B471_RS0117830}}
−
{{#set: in pathway=map01100|map00780|map00061|map01040}}
+
{{#set: in pathway=map01100|map01110|map00770|map00290|map01210|map01230|map01130}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-cljungdahlii|orthology-bsubtilis}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=cljungdahlii}}
 

Revision as of 23:37, 20 March 2018

Reaction DHAD1

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Dihydroxy-acid dehydratase (2,3-dihydroxy-3-methylbutanoate)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 (R)-2,3-Dihydroxy-3-methylbutanoate[c] => 1.0 3-Methyl-2-oxobutanoate[c] + 1.0 H2O H2O[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • EC Number : 4.2.1.9
  • MetaNetX (MNX) Equation : MNXR97358
  • KEGG Reaction : R04441
  • BioCyc : META:DIHYDROXYISOVALDEHYDRAT-RXN




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