Difference between revisions of "Pa181"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/AGDC AGDC] == * direction: ** LEFT-TO-RIGHT * common name: ** N-acetylglucosamine-6-phosphate deace...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PHETRS PHETRS] == * direction: ** LEFT-TO-RIGHT * common name: ** Phenylalanyl-tRNA synthetase * Sy...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/AGDC AGDC] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/PHETRS PHETRS] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** N-acetylglucosamine-6-phosphate deacetylase
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** Phenylalanyl-tRNA synthetase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[h2o]][c] '''+''' 1.0 [[acgam6p]][c] '''=>''' 1.0 [[ac]][c] '''+''' 1.0 [[gam6p]][c]
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** 1.0 [[atp]][c] '''+''' 1.0 [[trnaphe]][c] '''+''' 1.0 [[phe__L]][c] '''=>''' 1.0 [[phetrna]][c] '''+''' 1.0 [[amp]][c] '''+''' 1.0 [[ppi]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 H2O H2O[c] '''+''' 1.0 N-Acetyl-D-glucosamine 6-phosphate[c] '''=>''' 1.0 Acetate[c] '''+''' 1.0 D-Glucosamine 6-phosphate[c]
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** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 TRNA(Phe)[c] '''+''' 1.0 L-Phenylalanine[c] '''=>''' 1.0 L-Phenylalanyl-tRNA(Phe)[c] '''+''' 1.0 AMP C10H12N5O7P[c] '''+''' 1.0 Diphosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Genes have been associated with this reaction based on different elements listed below.
 
* [[B471_RS24325]]
 
** [[pantograph]]-[[bsubtilis]]
 
 
== Pathways  ==
 
== Pathways  ==
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
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* [[map00970]]: [http://www.genome.jp/dbget-bin/www_bget?map00970 map00970]
** '''148''' reactions found over '''694''' reactions in the full pathway
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** '''7''' reactions found over '''49''' reactions in the full pathway
* [[map00520]]: [http://www.genome.jp/dbget-bin/www_bget?map00520 map00520]
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** '''19''' reactions found over '''80''' reactions in the full pathway
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* [[map00052]]: [http://www.genome.jp/dbget-bin/www_bget?map00052 map00052]
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** '''9''' reactions found over '''67''' reactions in the full pathway
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== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
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* Category: [[manual]]
** [[pantograph]]:
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** Source: [[manual-reaction_to_add_delete]]
*** [[bsubtilis]]
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*** Comment: [[reaction added from literature evidence or biological expertise]]
 
== External links  ==
 
== External links  ==
* RHEA:
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* Reactome : REACT_R-HSA-379848
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22936 22936]
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* MetaNetX (MNX) Equation : MNXR102634
* BioCyc : META:NAG6PDEACET-RXN
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* KEGG Reaction : R03660
* MetaNetX (MNX) Equation : MNXR95528
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* EC Number : 6.1.1.20
* KEGG Reaction : R02059
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* EC Number : 3.5.1.25
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{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=N-acetylglucosamine-6-phosphate deacetylase}}
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{{#set: common name=Phenylalanyl-tRNA synthetase}}
{{#set: gene associated=B471_RS24325}}
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{{#set: in pathway=map00970}}
{{#set: in pathway=map01130|map00520|map00052}}
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{{#set: reconstruction category=manual}}
{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=manual-reaction_to_add_delete}}
{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction comment=reaction added from literature evidence or biological expertise}}
{{#set: reconstruction source=bsubtilis}}
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Revision as of 23:37, 20 March 2018

Reaction PHETRS

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Phenylalanyl-tRNA synthetase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 ATP C10H12N5O13P3[c] + 1.0 TRNA(Phe)[c] + 1.0 L-Phenylalanine[c] => 1.0 L-Phenylalanyl-tRNA(Phe)[c] + 1.0 AMP C10H12N5O7P[c] + 1.0 Diphosphate[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links

  • Reactome : REACT_R-HSA-379848
  • MetaNetX (MNX) Equation : MNXR102634
  • KEGG Reaction : R03660
  • EC Number : 6.1.1.20