Difference between revisions of "6pgl"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PSSA140 PSSA140] == * direction: ** LEFT-TO-RIGHT * common name: ** Phosphatidylserine syntase (n-C...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/HMBS HMBS] == * direction: ** LEFT-TO-RIGHT * common name: ** Hydroxymethylbilane synthase * Synony...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/PSSA140 PSSA140] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/HMBS HMBS] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** Phosphatidylserine syntase (n-C14:0)
+
** Hydroxymethylbilane synthase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[cdpdtdecg]][c] '''+''' 1.0 [[ser__L]][c] '''=>''' 1.0 [[cmp]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[ps140]][c]
+
** 4.0 [[ppbng]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 4.0 [[nh4]][c] '''+''' 1.0 [[hmbil]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 CDP-1,2-ditetradecanoylglycerol[c] '''+''' 1.0 L-Serine[c] '''=>''' 1.0 CMP C9H12N3O8P[c] '''+''' 1.0 H+[c] '''+''' 1.0 Phosphatidylserine (ditetradecanoyl, n-C14:0)[c]
+
** 4.0 Porphobilinogen[c] '''+''' 1.0 H2O H2O[c] '''=>''' 4.0 Ammonium[c] '''+''' 1.0 Hydroxymethylbilane[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[B471_RS0108700]]
 +
** [[pantograph]]-[[bsubtilis]]
 +
** [[pantograph]]-[[aferrooxidans]]
 
== Pathways  ==
 
== Pathways  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[manual]]:
+
* Category: [[orthology]]
** [[reaction added from literature evidence or biological expertise]]
+
** Source: [[orthology-bsubtilis]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-aferrooxidans]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
* MetaNetX (MNX) Equation : MNXR103267
+
* EC Number : 2.5.1.61
 +
* BioCyc : META:OHMETHYLBILANESYN-RXN
 +
* MetaNetX (MNX) Equation : MNXR100658
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13185 13185]
 +
* Reactome : REACT_R-ATH-189406
 +
* KEGG Reaction : R00084
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=Phosphatidylserine syntase (n-C14:0)}}
+
{{#set: common name=Hydroxymethylbilane synthase}}
 +
{{#set: gene associated=B471_RS0108700}}
 
{{#set: in pathway=}}
 
{{#set: in pathway=}}
{{#set: reconstruction category=manual}}
+
{{#set: reconstruction category=orthology}}
{{#set: reconstruction source=reaction added from literature evidence or biological expertise}}
+
{{#set: reconstruction source=orthology-bsubtilis|orthology-aferrooxidans}}
 +
{{#set: reconstruction tool=pantograph}}

Revision as of 23:38, 20 March 2018

Reaction HMBS

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Hydroxymethylbilane synthase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 4.0 Porphobilinogen[c] + 1.0 H2O H2O[c] => 4.0 Ammonium[c] + 1.0 Hydroxymethylbilane[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • EC Number : 2.5.1.61
  • BioCyc : META:OHMETHYLBILANESYN-RXN
  • MetaNetX (MNX) Equation : MNXR100658
  • RHEA:
  • Reactome : REACT_R-ATH-189406
  • KEGG Reaction : R00084