Difference between revisions of "Succ"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PSP_L PSP_L] == * direction: ** LEFT-TO-RIGHT * common name: ** Phosphoserine phosphatase (L-serine...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GALUi GALUi] == * direction: ** LEFT-TO-RIGHT * common name: ** UTP-glucose-1-phosphate uridylyltra...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/PSP_L PSP_L] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/GALUi GALUi] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Phosphoserine phosphatase (L-serine)
+
** UTP-glucose-1-phosphate uridylyltransferase (irreversible)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[h2o]][c] '''+''' 1.0 [[pser__L]][c] '''=>''' 1.0 [[pi]][c] '''+''' 1.0 [[ser__L]][c]
+
** 1.0 [[g1p]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[utp]][c] '''=>''' 1.0 [[udpg]][c] '''+''' 1.0 [[ppi]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 H2O H2O[c] '''+''' 1.0 O-Phospho-L-serine[c] '''=>''' 1.0 Phosphate[c] '''+''' 1.0 L-Serine[c]
+
** 1.0 D-Glucose 1-phosphate[c] '''+''' 1.0 H+[c] '''+''' 1.0 UTP C9H11N2O15P3[c] '''=>''' 1.0 UDPglucose[c] '''+''' 1.0 Diphosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[B471_RS0107615]]
 +
** [[pantograph]]-[[cljungdahlii]]
 +
** [[pantograph]]-[[bsubtilis]]
 +
** [[pantograph]]-[[aferrooxidans]]
 
== Pathways  ==
 
== Pathways  ==
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
−
** '''472''' reactions found over '''2349''' reactions in the full pathway
+
** '''471''' reactions found over '''2349''' reactions in the full pathway
−
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
+
* [[map00520]]: [http://www.genome.jp/dbget-bin/www_bget?map00520 map00520]
−
** '''101''' reactions found over '''715''' reactions in the full pathway
+
** '''19''' reactions found over '''80''' reactions in the full pathway
−
* [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200]
+
* [[map00040]]: [http://www.genome.jp/dbget-bin/www_bget?map00040 map00040]
−
** '''51''' reactions found over '''220''' reactions in the full pathway
+
** '''6''' reactions found over '''54''' reactions in the full pathway
−
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
+
* [[map00052]]: [http://www.genome.jp/dbget-bin/www_bget?map00052 map00052]
−
** '''78''' reactions found over '''228''' reactions in the full pathway
+
** '''9''' reactions found over '''67''' reactions in the full pathway
−
* [[map00680]]: [http://www.genome.jp/dbget-bin/www_bget?map00680 map00680]
+
* [[map00500]]: [http://www.genome.jp/dbget-bin/www_bget?map00500 map00500]
−
** '''14''' reactions found over '''75''' reactions in the full pathway
+
** '''9''' reactions found over '''81''' reactions in the full pathway
−
* [[map00260]]: [http://www.genome.jp/dbget-bin/www_bget?map00260 map00260]
+
−
** '''24''' reactions found over '''133''' reactions in the full pathway
+
 
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
** '''148''' reactions found over '''694''' reactions in the full pathway
 
** '''148''' reactions found over '''694''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[manual]]:
+
* Category: [[orthology]]
−
** [[reaction added from literature evidence or biological expertise]]
+
** Source: [[orthology-cljungdahlii]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-bsubtilis]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-aferrooxidans]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 +
* EC Number : 2.7.7.64
 +
* BioCyc : META:GLUC1PURIDYLTRANS-RXN
 +
* MetaNetX (MNX) Equation : MNXR100022
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21208 21208]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19889 19889]
−
* BioCyc : META:RXN0-5114
+
* Reactome : REACT_R-ATH-70286
−
* MetaNetX (MNX) Equation : MNXR103260
+
* KEGG Reaction : R00289
−
* KEGG Reaction : R00582
+
−
* EC Number : 3.1.3.3
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Phosphoserine phosphatase (L-serine)}}
+
{{#set: common name=UTP-glucose-1-phosphate uridylyltransferase (irreversible)}}
−
{{#set: in pathway=map01100|map01120|map01200|map01230|map00680|map00260|map01130}}
+
{{#set: gene associated=B471_RS0107615}}
−
{{#set: reconstruction category=manual}}
+
{{#set: in pathway=map01100|map00520|map00040|map00052|map00500|map01130}}
−
{{#set: reconstruction source=reaction added from literature evidence or biological expertise}}
+
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-cljungdahlii|orthology-bsubtilis|orthology-aferrooxidans}}
 +
{{#set: reconstruction tool=pantograph}}

Revision as of 23:39, 20 March 2018

Reaction GALUi

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • UTP-glucose-1-phosphate uridylyltransferase (irreversible)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 D-Glucose 1-phosphate[c] + 1.0 H+[c] + 1.0 UTP C9H11N2O15P3[c] => 1.0 UDPglucose[c] + 1.0 Diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • EC Number : 2.7.7.64
  • BioCyc : META:GLUC1PURIDYLTRANS-RXN
  • MetaNetX (MNX) Equation : MNXR100022
  • RHEA:
  • Reactome : REACT_R-ATH-70286
  • KEGG Reaction : R00289




Retrieved from "http://gem-aureme.irisa.fr/cutigem/index.php?title=Succ&oldid=3952"