Difference between revisions of "Uppg3"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GK1 GK1] == * direction: ** REVERSIBLE * common name: ** Guanylate kinase (GMP:ATP) * Synonym(s):...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/NTPP1 NTPP1] == * direction: ** LEFT-TO-RIGHT * common name: ** Nucleoside triphosphate pyrophospho...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/GK1 GK1] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/NTPP1 NTPP1] ==
 
* direction:
 
* direction:
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** Guanylate kinase (GMP:ATP)
+
** Nucleoside triphosphate pyrophosphorylase (dgtp)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[gmp]][c] '''+''' 1.0 [[atp]][c] '''<=>''' 1.0 [[adp]][c] '''+''' 1.0 [[gdp]][c]
+
** 1.0 [[dgtp]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[dgmp]][c] '''+''' 1.0 [[ppi]][c] '''+''' 1.0 [[h]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 GMP C10H12N5O8P[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''<=>''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 GDP C10H12N5O11P2[c]
+
** 1.0 DGTP C10H12N5O13P3[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 DGMP C10H12N5O7P[c] '''+''' 1.0 Diphosphate[c] '''+''' 1.0 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[B471_RS0114740]]
+
* [[B471_RS0107495]]
 
** [[pantograph]]-[[cljungdahlii]]
 
** [[pantograph]]-[[cljungdahlii]]
** [[pantograph]]-[[bsubtilis]]
 
** [[pantograph]]-[[aferrooxidans]]
 
 
== Pathways  ==
 
== Pathways  ==
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''472''' reactions found over '''2349''' reactions in the full pathway
 
 
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
 
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
 
** '''64''' reactions found over '''298''' reactions in the full pathway
 
** '''64''' reactions found over '''298''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
+
* Category: [[orthology]]
** [[pantograph]]:
+
** Source: [[orthology-cljungdahlii]]
*** [[aferrooxidans]]
+
*** Tool: [[pantograph]]
*** [[cljungdahlii]]
+
*** [[bsubtilis]]
+
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20780 20780]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28362 28362]
* BioCyc : META:GUANYL-KIN-RXN
+
* EC Number : 3.6.1.-
* MetaNetX (MNX) Equation : MNXR100144
+
* MetaNetX (MNX) Equation : MNXR102049
* KEGG Reaction : R00332
+
* KEGG Reaction : R01855
* EC Number : 2.7.4.8
+
* BioCyc : META:RXN0-385
{{#set: direction=REVERSIBLE}}
+
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=Guanylate kinase (GMP:ATP)}}
+
{{#set: common name=Nucleoside triphosphate pyrophosphorylase (dgtp)}}
{{#set: gene associated=B471_RS0114740}}
+
{{#set: gene associated=B471_RS0107495}}
{{#set: in pathway=map01100|map00230}}
+
{{#set: in pathway=map00230}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-cljungdahlii}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction source=aferrooxidans|cljungdahlii|bsubtilis}}
 

Revision as of 23:40, 20 March 2018

Reaction NTPP1

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Nucleoside triphosphate pyrophosphorylase (dgtp)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 DGTP C10H12N5O13P3[c] + 1.0 H2O H2O[c] => 1.0 DGMP C10H12N5O7P[c] + 1.0 Diphosphate[c] + 1.0 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • EC Number : 3.6.1.-
  • MetaNetX (MNX) Equation : MNXR102049
  • KEGG Reaction : R01855
  • BioCyc : META:RXN0-385