Difference between revisions of "3c2hmp"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/UPP3MT1_AFE UPP3MT1_AFE] == * direction: ** REVERSIBLE * common name: ** Uroporphyrinogen-III C-met...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ALAALAr ALAALAr] == * direction: ** REVERSIBLE * common name: ** D-alanine-D-alanine ligase (revers...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/UPP3MT1_AFE UPP3MT1_AFE] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/ALAALAr ALAALAr] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
 
* common name:
 
* common name:
−
** Uroporphyrinogen-III C-methyltransferase
+
** D-alanine-D-alanine ligase (reversible)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[amet]][c] '''+''' 1.0 [[pre1]][c] '''<=>''' 1.0 [[dscl]][c] '''+''' 1.0 [[ahcys]][c]
+
** 2.0 [[ala__D]][c] '''+''' 1.0 [[atp]][c] '''<=>''' 1.0 [[alaala]][c] '''+''' 1.0 [[pi]][c] '''+''' 1.0 [[adp]][c] '''+''' 1.0 [[h]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 S-Adenosyl-L-methionine[c] '''+''' 1.0 Precorrin_1[c] '''<=>''' 1.0 Dihydrosirohydrochlorin[c] '''+''' 1.0 S-Adenosyl-L-homocysteine[c]
+
** 2.0 D-Alanine[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''<=>''' 1.0 D-Alanyl-D-alanine[c] '''+''' 1.0 Phosphate[c] '''+''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[B471_RS24115]]
+
* [[B471_RS0112130]]
 +
** [[pantograph]]-[[cljungdahlii]]
 +
** [[pantograph]]-[[bsubtilis]]
 
** [[pantograph]]-[[aferrooxidans]]
 
** [[pantograph]]-[[aferrooxidans]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''471''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map00473]]: [http://www.genome.jp/dbget-bin/www_bget?map00473 map00473]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[map00550]]: [http://www.genome.jp/dbget-bin/www_bget?map00550 map00550]
 +
** '''14''' reactions found over '''27''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-cljungdahlii]]
−
*** [[aferrooxidans]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-bsubtilis]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-aferrooxidans]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11224 11224]
 +
* EC Number : 6.3.2.4
 +
* MetaNetX (MNX) Equation : MNXR95678
 +
* KEGG Reaction : R01150
 +
* BioCyc : META:DALADALALIG-RXN
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=Uroporphyrinogen-III C-methyltransferase }}
+
{{#set: common name=D-alanine-D-alanine ligase (reversible)}}
−
{{#set: gene associated=B471_RS24115}}
+
{{#set: gene associated=B471_RS0112130}}
−
{{#set: in pathway=}}
+
{{#set: in pathway=map01100|map00473|map00550}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-cljungdahlii|orthology-bsubtilis|orthology-aferrooxidans}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=aferrooxidans}}
 

Revision as of 23:41, 20 March 2018

Reaction ALAALAr

  • direction:
    • REVERSIBLE
  • common name:
    • D-alanine-D-alanine ligase (reversible)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 2.0 D-Alanine[c] + 1.0 ATP C10H12N5O13P3[c] <=> 1.0 D-Alanyl-D-alanine[c] + 1.0 Phosphate[c] + 1.0 ADP C10H12N5O10P2[c] + 1.0 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • EC Number : 6.3.2.4
  • MetaNetX (MNX) Equation : MNXR95678
  • KEGG Reaction : R01150
  • BioCyc : META:DALADALALIG-RXN




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