Difference between revisions of "S"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/3HAD161 3HAD161] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-hydroxyacyl-[acyl-carrier-pro...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ADMDC ADMDC] == * direction: ** LEFT-TO-RIGHT * common name: ** Adenosylmethionine decarboxylase *...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/3HAD161 3HAD161] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/ADMDC ADMDC] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C16:1)
+
** Adenosylmethionine decarboxylase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[3hcpalm9eACP]][c] '''=>''' 1.0 [[t3c9palmeACP]][c] '''+''' 1.0 [[h2o]][c]
+
** 1.0 [[amet]][c] '''+''' 1.0 [[h]][c] '''=>''' 1.0 [[ametam]][c] '''+''' 1.0 [[co2]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 (R)-3-hydroxy-cis-palm-9-eoyl-[acyl-carrier protein][c] '''=>''' 1.0 Trans-3-cis-9-palmitoleoyl-[acyl-carrier protein][c] '''+''' 1.0 H2O H2O[c]
+
** 1.0 S-Adenosyl-L-methionine[c] '''+''' 1.0 H+[c] '''=>''' 1.0 S-Adenosylmethioninamine[c] '''+''' 1.0 CO2 CO2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[B471_RS0100905]]
 +
** [[pantograph]]-[[cljungdahlii]]
 +
** [[pantograph]]-[[bsubtilis]]
 +
** [[pantograph]]-[[aferrooxidans]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''471''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map00270]]: [http://www.genome.jp/dbget-bin/www_bget?map00270 map00270]
 +
** '''24''' reactions found over '''135''' reactions in the full pathway
 +
* [[map00330]]: [http://www.genome.jp/dbget-bin/www_bget?map00330 map00330]
 +
** '''19''' reactions found over '''149''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[manual]]:
+
* Category: [[orthology]]
** [[reaction added from literature evidence or biological expertise]]
+
** Source: [[orthology-cljungdahlii]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-bsubtilis]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-aferrooxidans]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
* MetaNetX (MNX) Equation : MNXR94882
+
* RHEA:
* EC Number : 4.2.1.61
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15981 15981]
 +
* EC Number : 4.1.1.50
 +
* MetaNetX (MNX) Equation : MNXR95455
 +
* KEGG Reaction : R00178
 +
* BioCyc : META:SAMDECARB-RXN
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C16:1)}}
+
{{#set: common name=Adenosylmethionine decarboxylase}}
{{#set: in pathway=}}
+
{{#set: gene associated=B471_RS0100905}}
{{#set: reconstruction category=manual}}
+
{{#set: in pathway=map01100|map00270|map00330}}
{{#set: reconstruction source=reaction added from literature evidence or biological expertise}}
+
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-cljungdahlii|orthology-bsubtilis|orthology-aferrooxidans}}
 +
{{#set: reconstruction tool=pantograph}}

Revision as of 23:41, 20 March 2018

Reaction ADMDC

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Adenosylmethionine decarboxylase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 S-Adenosyl-L-methionine[c] + 1.0 H+[c] => 1.0 S-Adenosylmethioninamine[c] + 1.0 CO2 CO2[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • EC Number : 4.1.1.50
  • MetaNetX (MNX) Equation : MNXR95455
  • KEGG Reaction : R00178
  • BioCyc : META:SAMDECARB-RXN