Difference between revisions of "PGAMT"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/MTAP_CUT MTAP_CUT] == * direction: ** REVERSIBLE * Synonym(s): == Reaction Formula == * With ident...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PGAMT PGAMT] == * direction: ** REVERSIBLE * common name: ** Phosphoglucosamine mutase * Synonym(s)...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/MTAP_CUT MTAP_CUT] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/PGAMT PGAMT] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
 +
* common name:
 +
** Phosphoglucosamine mutase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[pi]][c] '''+''' 1.0 [[5mta]][c] '''<=>''' 1.0 [[ade]][c] '''+''' 1.0 [[5mdr1p]][c]
+
** 1.0 [[gam1p]][c] '''<=>''' 1.0 [[gam6p]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 Phosphate[c] '''+''' 1.0 5-Methylthioadenosine[c] '''<=>''' 1.0 Adenine[c] '''+''' 1.0 5-Methylthio-5-deoxy-D-ribose 1-phosphate[c]
+
** 1.0 D-Glucosamine 1-phosphate[c] '''<=>''' 1.0 D-Glucosamine 6-phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[B471_RS0100890]]
+
* Gene: [[B471_RS0105610]]
** missing_rxn_creator
+
** Source: [[orthology-cljungdahlii]]
 +
** Source: [[orthology-bsubtilis]]
 +
** Source: [[orthology-aferrooxidans]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''471''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map00520]]: [http://www.genome.jp/dbget-bin/www_bget?map00520 map00520]
 +
** '''19''' reactions found over '''80''' reactions in the full pathway
 +
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 +
** '''148''' reactions found over '''694''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* Category: [[manual]]
+
* Category: [[orthology]]
** Source: [[manual-missing_rxn_creator]]
+
** Source: [[orthology-cljungdahlii]]
*** Comment: [[reaction found from orthology but we fixed reversibility based on biological expertise]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-bsubtilis]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-aferrooxidans]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23424 23424]
 +
* EC Number : 5.4.2.10
 +
* MetaNetX (MNX) Equation : MNXR102526
 +
* KEGG Reaction : R02060
 +
* BioCyc : META:5.4.2.10-RXN
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
{{#set: gene associated=B471_RS0100890}}
+
{{#set: common name=Phosphoglucosamine mutase}}
{{#set: in pathway=}}
+
{{#set: gene associated=B471_RS0105610}}
{{#set: reconstruction category=manual}}
+
{{#set: in pathway=map01100|map00520|map01130}}
{{#set: reconstruction source=manual-missing_rxn_creator}}
+
{{#set: reconstruction category=orthology}}
{{#set: reconstruction comment=reaction found from orthology but we fixed reversibility based on biological expertise}}
+
{{#set: reconstruction source=orthology-cljungdahlii|orthology-bsubtilis|orthology-aferrooxidans}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:36, 21 March 2018

Reaction PGAMT

  • direction:
    • REVERSIBLE
  • common name:
    • Phosphoglucosamine mutase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 D-Glucosamine 1-phosphate[c] <=> 1.0 D-Glucosamine 6-phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • EC Number : 5.4.2.10
  • MetaNetX (MNX) Equation : MNXR102526
  • KEGG Reaction : R02060
  • BioCyc : META:5.4.2.10-RXN