Difference between revisions of "PYNP1"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ORNTAC ORNTAC] == * direction: ** REVERSIBLE * common name: ** Ornithine transacetylase * Synonym(s...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PYNP1 PYNP1] == * direction: ** LEFT-TO-RIGHT * common name: ** Pyrimidine-nucleoside phosphorylase...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/ORNTAC ORNTAC] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/PYNP1 PYNP1] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Ornithine transacetylase
+
** Pyrimidine-nucleoside phosphorylase (cytosine)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[acorn]][c] '''+''' 1.0 [[glu__L]][c] '''<=>''' 1.0 [[acglu]][c] '''+''' 1.0 [[orn]][c]
+
** 1.0 [[csn]][c] '''+''' 1.0 [[r1p]][c] '''=>''' 1.0 [[pi]][c] '''+''' 1.0 [[cytd]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 N2-Acetyl-L-ornithine[c] '''+''' 1.0 L-Glutamate[c] '''<=>''' 1.0 N-Acetyl-L-glutamate[c] '''+''' 1.0 Ornithine[c]
+
** 1.0 Cytosine[c] '''+''' 1.0 Alpha-D-Ribose 1-phosphate[c] '''=>''' 1.0 Phosphate[c] '''+''' 1.0 Cytidine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[B471_RS23385]]
+
* Gene: [[B471_RS0113285]]
−
** [[pantograph]]-[[aferrooxidans]]
+
** Source: [[orthology-cljungdahlii]]
−
* [[B471_RS0117540]]
+
** Source: [[orthology-bsubtilis]]
−
** [[pantograph]]-[[cljungdahlii]]
+
−
* [[B471_RS21960]]
+
−
** [[pantograph]]-[[aferrooxidans]]
+
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
 +
** '''68''' reactions found over '''244''' reactions in the full pathway
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''471''' reactions found over '''2349''' reactions in the full pathway
 
** '''471''' reactions found over '''2349''' reactions in the full pathway
−
* [[map01210]]: [http://www.genome.jp/dbget-bin/www_bget?map01210 map01210]
 
−
** '''26''' reactions found over '''80''' reactions in the full pathway
 
−
* [[map00220]]: [http://www.genome.jp/dbget-bin/www_bget?map00220 map00220]
 
−
** '''13''' reactions found over '''65''' reactions in the full pathway
 
−
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
 
−
** '''78''' reactions found over '''228''' reactions in the full pathway
 
−
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
−
** '''148''' reactions found over '''694''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
 
** Source: [[orthology-cljungdahlii]]
 
** Source: [[orthology-cljungdahlii]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
−
** Source: [[orthology-aferrooxidans]]
+
** Source: [[orthology-bsubtilis]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* MetaNetX (MNX) Equation : MNXR103376
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15349 15349]
+
* KEGG Reaction : R02296
−
* EC Number : 2.3.1.35
+
* EC Number : 2.4.2.2
−
* MetaNetX (MNX) Equation : MNXR102221
+
{{#set: direction=LEFT-TO-RIGHT}}
−
* KEGG Reaction : R02282
+
{{#set: common name=Pyrimidine-nucleoside phosphorylase (cytosine)}}
−
* BioCyc : META:GLUTAMATE-N-ACETYLTRANSFERASE-RXN
+
{{#set: gene associated=B471_RS0113285}}
−
{{#set: direction=REVERSIBLE}}
+
{{#set: in pathway=map00240|map01100}}
−
{{#set: common name=Ornithine transacetylase}}
+
−
{{#set: gene associated=B471_RS23385|B471_RS0117540|B471_RS21960}}
+
−
{{#set: in pathway=map01100|map01210|map00220|map01230|map01130}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction source=orthology-cljungdahlii|orthology-aferrooxidans}}
+
{{#set: reconstruction source=orthology-cljungdahlii|orthology-bsubtilis}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:36, 21 March 2018

Reaction PYNP1

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Pyrimidine-nucleoside phosphorylase (cytosine)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Cytosine[c] + 1.0 Alpha-D-Ribose 1-phosphate[c] => 1.0 Phosphate[c] + 1.0 Cytidine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR103376
  • KEGG Reaction : R02296
  • EC Number : 2.4.2.2




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