Difference between revisions of "PLPS"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/E4PD E4PD] == * direction: ** REVERSIBLE * common name: ** Erythrose 4-phosphate dehydrogenase * Sy...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PLPS PLPS] == * direction: ** LEFT-TO-RIGHT * common name: ** Pyridoxal-5-phosphate synthase * Syno...")
 
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/E4PD E4PD] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/PLPS PLPS] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Erythrose 4-phosphate dehydrogenase
+
** Pyridoxal-5-phosphate synthase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[e4p]][c] '''+''' 1.0 [[h2o]][c] '''+''' 1.0 [[nad]][c] '''<=>''' 2.0 [[h]][c] '''+''' 1.0 [[nadh]][c] '''+''' 1.0 [[4per]][c]
+
** 1.0 [[gln__L]][c] '''+''' 1.0 [[g3p]][c] '''+''' 1.0 [[r5p]][c] '''=>''' 1.0 [[glu__L]][c] '''+''' 1.0 [[pydx5p]][c] '''+''' 3.0 [[h2o]][c] '''+''' 1.0 [[pi]][c] '''+''' 1.0 [[h]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 D-Erythrose 4-phosphate[c] '''+''' 1.0 H2O H2O[c] '''+''' 1.0 Nicotinamide adenine dinucleotide[c] '''<=>''' 2.0 H+[c] '''+''' 1.0 Nicotinamide adenine dinucleotide - reduced[c] '''+''' 1.0 4-Phospho-D-erythronate[c]
+
** 1.0 L-Glutamine[c] '''+''' 1.0 Glyceraldehyde 3-phosphate[c] '''+''' 1.0 Alpha-D-Ribose 5-phosphate[c] '''=>''' 1.0 L-Glutamate[c] '''+''' 1.0 Pyridoxal 5'-phosphate[c] '''+''' 3.0 H2O H2O[c] '''+''' 1.0 Phosphate[c] '''+''' 1.0 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[B471_RS0119330]]
+
* Gene: [[B471_RS0112245]]
−
** [[pantograph]]-[[aferrooxidans]]
+
** Source: [[orthology-cljungdahlii]]
 +
* Gene: [[B471_RS0112240]]
 +
** Source: [[orthology-cljungdahlii]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
−
** '''471''' reactions found over '''2349''' reactions in the full pathway
 
−
* [[map00750]]: [http://www.genome.jp/dbget-bin/www_bget?map00750 map00750]
 
−
** '''6''' reactions found over '''25''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-aferrooxidans]]
+
** Source: [[orthology-cljungdahlii]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* MetaNetX (MNX) Equation : MNXR103011
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12056 12056]
+
{{#set: direction=LEFT-TO-RIGHT}}
−
* EC Number : 1.2.1.72
+
{{#set: common name=Pyridoxal-5-phosphate synthase}}
−
* MetaNetX (MNX) Equation : MNXR97842
+
{{#set: gene associated=B471_RS0112245|B471_RS0112240}}
−
* KEGG Reaction : R01825
+
{{#set: in pathway=}}
−
* BioCyc : META:ERYTH4PDEHYDROG-RXN
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=Erythrose 4-phosphate dehydrogenase}}
+
−
{{#set: gene associated=B471_RS0119330}}
+
−
{{#set: in pathway=map01100|map00750}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction source=orthology-aferrooxidans}}
+
{{#set: reconstruction source=orthology-cljungdahlii}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:37, 21 March 2018

Reaction PLPS

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Pyridoxal-5-phosphate synthase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 L-Glutamine[c] + 1.0 Glyceraldehyde 3-phosphate[c] + 1.0 Alpha-D-Ribose 5-phosphate[c] => 1.0 L-Glutamate[c] + 1.0 Pyridoxal 5'-phosphate[c] + 3.0 H2O H2O[c] + 1.0 Phosphate[c] + 1.0 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR103011




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