Difference between revisions of "EAR160y CUT"

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(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230] == * common_name: ** Biosynthesis of amino acids * Synonym(s): == Reaction(s) foun...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/EAR160y_CUT EAR160y_CUT] == * direction: ** REVERSIBLE * Synonym(s): == Reaction Formula == * With...")
 
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/EAR160y_CUT EAR160y_CUT] ==
−
* common_name:
+
* direction:
−
** Biosynthesis of amino acids
+
** REVERSIBLE
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
'''78''' reactions found over '''228''' reactions in the full pathway
+
* With identifiers:
−
* [[ACGK]]
+
** 1.0 [[tpalm2eACP]][c] '''+''' 1.0 [[nadph]][c] '''+''' 1.0 [[h]][c] '''<=>''' 1.0 [[palmACP]][c] '''+''' 1.0 [[nadp]][c]
−
** 2 associated gene(s):
+
* With common name(s):
−
*** [[B471_RS23385]]
+
** 1.0 Trans-Hexadec-2-enoyl-[acyl-carrier protein][c] '''+''' 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c] '''+''' 1.0 H+[c] '''<=>''' 1.0 Palmitoyl-ACP (n-C16:0ACP)[c] '''+''' 1.0 Nicotinamide adenine dinucleotide phosphate[c]
−
*** [[B471_RS21960]]
+
 
−
** 3 reconstruction source(s) associated:
+
== Genes associated with this reaction  ==
−
*** [[orthology-cljungdahlii]]
+
Genes have been associated with this reaction based on different elements listed below.
−
*** [[orthology-bsubtilis]]
+
* Gene: [[B471_RS0108775]]
−
*** [[orthology-aferrooxidans]]
+
** Source: [[manual-missing_rxn_creator]]
−
* [[ACGS]]
+
== Pathways  ==
−
** 3 associated gene(s):
+
== Reconstruction information  ==
−
*** [[B471_RS0117540]]
+
* Category: [[manual]]
−
*** [[B471_RS21960]]
+
** Source: [[manual-missing_rxn_creator]]
−
*** [[B471_RS23385]]
+
*** Comment: [[reaction found from orthology but we fixed reversibility based on biological expertise]]
−
** 3 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[ACHBS]]
+
−
** 0 associated gene:
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[manual-reaction_to_add_delete]]
+
−
* [[ACLS]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0108550]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
* [[ACONT]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0105965]]
+
−
** 2 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
* [[ACOTA]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0117530]]
+
−
** 2 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[AGPR]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0117545]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[AHCYSNS]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS24265]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
* [[ANPRT]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0109410]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[ANS]]
+
−
** 2 associated gene(s):
+
−
*** [[B471_RS21775]]
+
−
*** [[B471_RS0109400]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[ARGN]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0119575]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
* [[ARGSL]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS23380]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[ARGSS]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0117525]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[ASAD]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0100620]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[ASP4DC]]
+
−
** 0 associated gene:
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[manual-reaction_to_add_delete]]
+
−
* [[ASPK]]
+
−
** 2 associated gene(s):
+
−
*** [[B471_RS0100615]]
+
−
*** [[B471_RS0107565]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[ASPTA]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0109180]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[ATPPRT]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0118325]]
+
−
** 2 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
* [[CHORM]]
+
−
** 3 associated gene(s):
+
−
*** [[B471_RS0109435]]
+
−
*** [[B471_RS0101030]]
+
−
*** [[B471_RS0108560]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[CHORS]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0101965]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[CS]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0109275]]
+
−
** 2 reconstruction source(s) associated:
+
−
*** [[orthology-bsubtilis]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[CYSS]]
+
−
** 3 associated gene(s):
+
−
*** [[B471_RS0106095]]
+
−
*** [[B471_RS0104440]]
+
−
*** [[B471_RS0108360]]
+
−
** 2 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[CYSTS]]
+
−
** 2 associated gene(s):
+
−
*** [[B471_RS0108360]]
+
−
*** [[B471_RS0104440]]
+
−
** 2 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[manual-reaction_to_add_delete]]
+
−
* [[DAPDC]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0101130]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[DAPE]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0109300]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[DDPA]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0109435]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[DHAD1]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0117830]]
+
−
** 2 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
* [[DHAD2]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0117830]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[DHQS]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0101955]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[ENO]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0119310]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[G5SADs]]
+
−
** 0 associated gene:
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[manual-reaction_to_add_delete]]
+
−
* [[G5SD]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0101260]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[GAPD]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0119330]]
+
−
** 2 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
* [[GAPDi_nadp]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0119330]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[GHMT2r]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0101930]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[GLU5K]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0101265]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[GLUSy]]
+
−
** 4 associated gene(s):
+
−
*** [[B471_RS0109970]]
+
−
*** [[B471_RS0105685]]
+
−
*** [[B471_RS0115910]]
+
−
*** [[B471_RS0103585]]
+
−
** 4 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
*** [[orthology-aferrooxidans]]
+
−
*** [[manual-reaction_to_add_delete]]
+
−
* [[HISTP]]
+
−
** 2 associated gene(s):
+
−
*** [[B471_RS0117855]]
+
−
*** [[B471_RS0118335]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[HSDy]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS23515]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[HSK]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0109990]]
+
−
** 2 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
* [[HSTPT]]
+
−
** 2 associated gene(s):
+
−
*** [[B471_RS0118315]]
+
−
*** [[B471_RS0116195]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
* [[ICDHyr]]
+
−
** 0 associated gene:
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[manual-reaction_to_add_delete]]
+
−
* [[IG3PS]]
+
−
** 2 associated gene(s):
+
−
*** [[B471_RS0118350]]
+
−
*** [[B471_RS23525]]
+
−
** 2 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[IGPDH]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0118335]]
+
−
** 2 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[IGPS]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0109415]]
+
−
** 2 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[ILETA]]
+
−
** 4 associated gene(s):
+
−
*** [[B471_RS0110105]]
+
−
*** [[B471_RS0102340]]
+
−
*** [[B471_RS0106435]]
+
−
*** [[B471_RS0109150]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[IPPS]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS21670]]
+
−
** 2 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
* [[LEUTA]]
+
−
** 4 associated gene(s):
+
−
*** [[B471_RS0106435]]
+
−
*** [[B471_RS0110105]]
+
−
*** [[B471_RS0102340]]
+
−
*** [[B471_RS0109150]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[METAT]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0117020]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[METS]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0109820]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[orthology-bsubtilis]]
+
−
* [[OCBT]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0119565]]
+
−
** 2 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[ORNTAC]]
+
−
** 3 associated gene(s):
+
−
*** [[B471_RS23385]]
+
−
*** [[B471_RS0117540]]
+
−
*** [[B471_RS21960]]
+
−
** 2 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[P5CR]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS21630]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[PC]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0103275]]
+
−
** 2 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
* [[PGCD]]
+
−
** 2 associated gene(s):
+
−
*** [[B471_RS0105500]]
+
−
*** [[B471_RS0108770]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[PGK]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0119325]]
+
−
** 2 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[PGM]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0119315]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
* [[PHETA1]]
+
−
** 3 associated gene(s):
+
−
*** [[B471_RS0109180]]
+
−
*** [[B471_RS23525]]
+
−
*** [[B471_RS0118315]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[PPNDH]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0108560]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[PRAMPC]]
+
−
** 0 associated gene:
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[manual-reaction_to_add_delete]]
+
−
* [[PRATPP]]
+
−
** 0 associated gene:
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[manual-reaction_to_add_delete]]
+
−
* [[PRMICI]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0118345]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[PRO1x]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0119645]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[orthology-bsubtilis]]
+
−
* [[PSCVT]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS21780]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[PSERT]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0105495]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
* [[PSP_L]]
+
−
** 0 associated gene:
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[manual-reaction_to_add_delete]]
+
−
* [[PYK]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0109145]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[RPE]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS23765]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[SDPDS]]
+
−
** 2 associated gene(s):
+
−
*** [[B471_RS0118440]]
+
−
*** [[B471_RS0119375]]
+
−
** 2 reconstruction source(s) associated:
+
−
*** [[orthology-bsubtilis]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[SDPTA]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0117530]]
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
* [[SERAT]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0118445]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[SHK3Dr]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS20360]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[SHKK]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS20350]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[THDPS]]
+
−
** 0 associated gene:
+
−
** 1 reconstruction source(s) associated:
+
−
*** [[manual-reaction_to_add_delete]]
+
−
* [[THRS]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0109995]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[TPI]]
+
−
** 1 associated gene(s):
+
−
*** [[B471_RS0119320]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
*** [[orthology-aferrooxidans]]
+
−
* [[TRPS1]]
+
−
** 2 associated gene(s):
+
−
*** [[B471_RS0109425]]
+
−
*** [[B471_RS0109430]]
+
−
** 2 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
* [[VALTA]]
+
−
** 4 associated gene(s):
+
−
*** [[B471_RS0109150]]
+
−
*** [[B471_RS0110105]]
+
−
*** [[B471_RS0106435]]
+
−
*** [[B471_RS0102340]]
+
−
** 3 reconstruction source(s) associated:
+
−
*** [[orthology-cljungdahlii]]
+
−
*** [[orthology-bsubtilis]]
+
−
*** [[orthology-aferrooxidans]]
+
−
== Reaction(s) not found ==
+
−
* [http://bigg.ucsd.edu/universal/reactions/AASAD3 AASAD3]
+
−
* [http://bigg.ucsd.edu/universal/reactions/AASAD3m AASAD3m]
+
−
* [http://bigg.ucsd.edu/universal/reactions/AATA AATA]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACGKm ACGKm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACGSm ACGSm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACHBSm ACHBSm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACLSm ACLSm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACODA ACODA]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACONTm ACONTm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACONTx ACONTx]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACOTAim ACOTAim]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACSERSULL ACSERSULL]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACSERSULLh ACSERSULLh]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ACSERSULLm ACSERSULLm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ADAPAT ADAPAT]
+
−
* [http://bigg.ucsd.edu/universal/reactions/AGPRim AGPRim]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ALATA_L ALATA_L]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ALATA_Lm ALATA_Lm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ANTPPT ANTPPT]
+
−
* [http://bigg.ucsd.edu/universal/reactions/AOOAh AOOAh]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ARGNm ARGNm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ARGSS_1 ARGSS_1]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ASADH ASADH]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ASPATh ASPATh]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ASPK_1 ASPK_1]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ASPTAm ASPTAm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ASPTAp ASPTAp]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ATNS ATNS]
+
−
* [http://bigg.ucsd.edu/universal/reactions/BCTA_glu_h BCTA_glu_h]
+
−
* [http://bigg.ucsd.edu/universal/reactions/BCTA_val_h BCTA_val_h]
+
−
* [http://bigg.ucsd.edu/universal/reactions/BCTAh BCTAh]
+
−
* [http://bigg.ucsd.edu/universal/reactions/CHRM CHRM]
+
−
* [http://bigg.ucsd.edu/universal/reactions/CHRS CHRS]
+
−
* [http://bigg.ucsd.edu/universal/reactions/CITCIb CITCIb]
+
−
* [http://bigg.ucsd.edu/universal/reactions/CSm CSm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/CSp CSp]
+
−
* [http://bigg.ucsd.edu/universal/reactions/CYSS_1 CYSS_1]
+
−
* [http://bigg.ucsd.edu/universal/reactions/DABAAT DABAAT]
+
−
* [http://bigg.ucsd.edu/universal/reactions/DAPDA DAPDA]
+
−
* [http://bigg.ucsd.edu/universal/reactions/DDPAm DDPAm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/DHAD1m DHAD1m]
+
−
* [http://bigg.ucsd.edu/universal/reactions/DHAD2m DHAD2m]
+
−
* [http://bigg.ucsd.edu/universal/reactions/DHAD_3mob_h DHAD_3mob_h]
+
−
* [http://bigg.ucsd.edu/universal/reactions/DHADh DHADh]
+
−
* [http://bigg.ucsd.edu/universal/reactions/DHQS_1 DHQS_1]
+
−
* [http://bigg.ucsd.edu/universal/reactions/DHQTi DHQTi]
+
−
* [http://bigg.ucsd.edu/universal/reactions/DPHS DPHS]
+
−
* [http://bigg.ucsd.edu/universal/reactions/DQDH DQDH]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ENOf ENOf]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ENOm ENOm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/FBAf FBAf]
+
−
* [http://bigg.ucsd.edu/universal/reactions/FBAh FBAh]
+
−
* [http://bigg.ucsd.edu/universal/reactions/FBAm FBAm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/G5DHx G5DHx]
+
−
* [http://bigg.ucsd.edu/universal/reactions/G5SADrm G5SADrm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/G5SDym G5SDym]
+
−
* [http://bigg.ucsd.edu/universal/reactions/GAPDH_nadp_hi GAPDH_nadp_hi]
+
−
* [http://bigg.ucsd.edu/universal/reactions/GAPDHf GAPDHf]
+
−
* [http://bigg.ucsd.edu/universal/reactions/GAPDHh GAPDHh]
+
−
* [http://bigg.ucsd.edu/universal/reactions/GAPDHm GAPDHm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/GHMT2rm GHMT2rm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/GLU5Km GLU5Km]
+
−
* [http://bigg.ucsd.edu/universal/reactions/GLUS_nadph GLUS_nadph]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HDH HDH]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HDHh HDHh]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HISTD HISTD]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HP HP]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HPh HPh]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HSDH HSDH]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HSDxi HSDxi]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HSK_1 HSK_1]
+
−
* [http://bigg.ucsd.edu/universal/reactions/HSST HSST]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ICDHhr ICDHhr]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ICDHx ICDHx]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ICDHxm ICDHxm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ICDHym ICDHym]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ICDHyp ICDHyp]
+
−
* [http://bigg.ucsd.edu/universal/reactions/IGPDh IGPDh]
+
−
* [http://bigg.ucsd.edu/universal/reactions/IGPS_1 IGPS_1]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ILETAm ILETAm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/IMGPSh IMGPSh]
+
−
* [http://bigg.ucsd.edu/universal/reactions/IPPSh IPPSh]
+
−
* [http://bigg.ucsd.edu/universal/reactions/IPPSm IPPSm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/KARI KARI]
+
−
* [http://bigg.ucsd.edu/universal/reactions/KARI_23dhmb KARI_23dhmb]
+
−
* [http://bigg.ucsd.edu/universal/reactions/KARI_23dhmp KARI_23dhmp]
+
−
* [http://bigg.ucsd.edu/universal/reactions/KARI_3hmoa KARI_3hmoa]
+
−
* [http://bigg.ucsd.edu/universal/reactions/LDAPAT LDAPAT]
+
−
* [http://bigg.ucsd.edu/universal/reactions/LEUTAi LEUTAi]
+
−
* [http://bigg.ucsd.edu/universal/reactions/LEUTAm LEUTAm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MATm MATm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/METS_1 METS_1]
+
−
* [http://bigg.ucsd.edu/universal/reactions/METSm METSm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MHPGLUT MHPGLUT]
+
−
* [http://bigg.ucsd.edu/universal/reactions/MS MS]
+
−
* [http://bigg.ucsd.edu/universal/reactions/OCBTm OCBTm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/OCT OCT]
+
−
* [http://bigg.ucsd.edu/universal/reactions/OCTh OCTh]
+
−
* [http://bigg.ucsd.edu/universal/reactions/OCTm OCTm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/ORNTACim ORNTACim]
+
−
* [http://bigg.ucsd.edu/universal/reactions/P5CRm P5CRm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/P5CRx P5CRx]
+
−
* [http://bigg.ucsd.edu/universal/reactions/P5CRxm P5CRxm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PCm PCm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PFKh PFKh]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PGKf PGKf]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PGKh PGKh]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PGKm PGKm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PGLYDH PGLYDH]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PGMf PGMf]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PGMm PGMm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PHETA1m PHETA1m]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PHETHPTOX PHETHPTOX]
+
−
* [http://bigg.ucsd.edu/universal/reactions/POATh POATh]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PPATDh PPATDh]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PRACHh PRACHh]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PRADPh PRADPh]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PRAI PRAI]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PRAIi PRAIi]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PRICIh PRICIh]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PRO1xm PRO1xm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PRO1y PRO1y]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PSAT PSAT]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PSCIT PSCIT]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PSP PSP]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PSP_Lpp PSP_Lpp]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PYKf PYKf]
+
−
* [http://bigg.ucsd.edu/universal/reactions/PYKm PYKm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/RHCCE RHCCE]
+
−
* [http://bigg.ucsd.edu/universal/reactions/RPEh RPEh]
+
−
* [http://bigg.ucsd.edu/universal/reactions/SACCD1 SACCD1]
+
−
* [http://bigg.ucsd.edu/universal/reactions/SACCD2 SACCD2]
+
−
* [http://bigg.ucsd.edu/universal/reactions/SACCD4m SACCD4m]
+
−
* [http://bigg.ucsd.edu/universal/reactions/SAT SAT]
+
−
* [http://bigg.ucsd.edu/universal/reactions/SATm SATm]
+
−
* [http://bigg.ucsd.edu/universal/reactions/SERH SERH]
+
−
* [http://bigg.ucsd.edu/universal/reactions/SER_AL SER_AL]
+
−
* [http://bigg.ucsd.edu/universal/reactions/SHSL1 SHSL1]
+
−
* [http://bigg.ucsd.edu/universal/reactions/SHSL1h SHSL1h]
+
−
* [http://bigg.ucsd.edu/universal/reactions/SKDH SKDH]
+
−
* [http://bigg.ucsd.edu/universal/reactions/SKK SKK]
+
−
* [http://bigg.ucsd.edu/universal/reactions/SLCYSS SLCYSS]
+
−
* [http://bigg.ucsd.edu/universal/reactions/TAh TAh]
+
−
* [http://bigg.ucsd.edu/universal/reactions/THPAT THPAT]
+
−
* [http://bigg.ucsd.edu/universal/reactions/THRA THRA]
+
−
* [http://bigg.ucsd.edu/universal/reactions/THRA_1 THRA_1]
+
−
* [http://bigg.ucsd.edu/universal/reactions/THRS_1 THRS_1]
+
−
* [http://bigg.ucsd.edu/universal/reactions/TKT2h TKT2h]
+
−
* [http://bigg.ucsd.edu/universal/reactions/TPIh TPIh]
+
−
* [http://bigg.ucsd.edu/universal/reactions/VALTAim VALTAim]
+
 
== External links  ==
 
== External links  ==
−
{{#set: common_name=Biosynthesis of amino acids}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: reaction found=78}}
+
{{#set: gene associated=B471_RS0108775}}
−
{{#set: total reaction=228}}
+
{{#set: in pathway=}}
−
{{#set: completion rate=34.0}}
+
{{#set: reconstruction category=manual}}
 +
{{#set: reconstruction source=manual-missing_rxn_creator}}
 +
{{#set: reconstruction comment=reaction found from orthology but we fixed reversibility based on biological expertise}}

Latest revision as of 15:38, 21 March 2018

Reaction EAR160y_CUT

  • direction:
    • REVERSIBLE
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Trans-Hexadec-2-enoyl-[acyl-carrier protein][c] + 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c] + 1.0 H+[c] <=> 1.0 Palmitoyl-ACP (n-C16:0ACP)[c] + 1.0 Nicotinamide adenine dinucleotide phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/cutigem/index.php?title=EAR160y_CUT&oldid=7560"