Difference between revisions of "SHKK"

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(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00472 map00472] == * common_name: ** D-Arginine and D-ornithine metabolism * Synonym(s): == Reacti...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/SHKK SHKK] == * direction: ** LEFT-TO-RIGHT * common name: ** Shikimate kinase * Synonym(s): == Re...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00472 map00472] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/SHKK SHKK] ==
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* common_name:
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* direction:
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** D-Arginine and D-ornithine metabolism
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** LEFT-TO-RIGHT
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* common name:
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** Shikimate kinase
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''1''' reactions found over '''8''' reactions in the full pathway
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* With identifiers:
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* [[DALAOX]]
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** 1.0 [[atp]][c] '''+''' 1.0 [[skm]][c] '''=>''' 1.0 [[skm5p]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[adp]][c]
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** 1 associated gene(s):
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* With common name(s):
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*** [[B471_RS0117705]]
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** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 Shikimate[c] '''=>''' 1.0 Shikimate 5-phosphate[c] '''+''' 1.0 H+[c] '''+''' 1.0 ADP C10H12N5O10P2[c]
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** 1 reconstruction source(s) associated:
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*** [[orthology-bsubtilis]]
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== Genes associated with this reaction  ==
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== Reaction(s) not found ==
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Genes have been associated with this reaction based on different elements listed below.
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* [http://bigg.ucsd.edu/universal/reactions/ALATA_D ALATA_D]
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* Gene: [[B471_RS20350]]
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* [http://bigg.ucsd.edu/universal/reactions/DALAOXx DALAOXx]
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** Source: [[orthology-cljungdahlii]]
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* [http://bigg.ucsd.edu/universal/reactions/DARGOp DARGOp]
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** Source: [[orthology-bsubtilis]]
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* [http://bigg.ucsd.edu/universal/reactions/DORNOp DORNOp]
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** Source: [[orthology-aferrooxidans]]
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* [http://bigg.ucsd.edu/universal/reactions/DPROOp DPROOp]
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== Pathways  ==
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* [http://bigg.ucsd.edu/universal/reactions/GLYOp GLYOp]
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
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* [http://bigg.ucsd.edu/universal/reactions/LYSRC LYSRC]
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** '''471''' reactions found over '''2349''' reactions in the full pathway
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* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
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** '''148''' reactions found over '''694''' reactions in the full pathway
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* [[map00400]]: [http://www.genome.jp/dbget-bin/www_bget?map00400 map00400]
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** '''17''' reactions found over '''59''' reactions in the full pathway
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* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
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** '''212''' reactions found over '''1054''' reactions in the full pathway
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* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
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** '''78''' reactions found over '''228''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-cljungdahlii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-bsubtilis]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-aferrooxidans]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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{{#set: common_name=D-Arginine and D-ornithine metabolism}}
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* EC Number : 2.7.1.71
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{{#set: reaction found=1}}
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* BioCyc : META:SHIKIMATE-KINASE-RXN
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{{#set: total reaction=8}}
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* MetaNetX (MNX) Equation : MNXR104379
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{{#set: completion rate=13.0}}
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13121 13121]
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* Reactome : REACT_R-MTU-964939
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* KEGG Reaction : R02412
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Shikimate kinase}}
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{{#set: gene associated=B471_RS20350}}
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{{#set: in pathway=map01100|map01130|map00400|map01110|map01230}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-cljungdahlii|orthology-bsubtilis|orthology-aferrooxidans}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:38, 21 March 2018

Reaction SHKK

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Shikimate kinase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 ATP C10H12N5O13P3[c] + 1.0 Shikimate[c] => 1.0 Shikimate 5-phosphate[c] + 1.0 H+[c] + 1.0 ADP C10H12N5O10P2[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • EC Number : 2.7.1.71
  • BioCyc : META:SHIKIMATE-KINASE-RXN
  • MetaNetX (MNX) Equation : MNXR104379
  • RHEA:
  • Reactome : REACT_R-MTU-964939
  • KEGG Reaction : R02412




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