Difference between revisions of "GLUSy"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/4c2me 4c2me] == * common name: ** 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol * Synonym...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GLUSy GLUSy] == * direction: ** LEFT-TO-RIGHT * common name: ** Glutamate synthase (NADPH) * Synony...")
 
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://bigg.ucsd.edu/universal/metabolites/4c2me 4c2me] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/GLUSy GLUSy] ==
 +
* direction:
 +
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol
+
** Glutamate synthase (NADPH)
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
* [[CDPMEK]]
+
* With identifiers:
−
== Reaction(s) known to produce the compound ==
+
** 1.0 [[nadph]][c] '''+''' 1.0 [[akg]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[gln__L]][c] '''=>''' 2.0 [[glu__L]][c] '''+''' 1.0 [[nadp]][c]
−
* [[MEPCT]]
+
* With common name(s):
−
== Reaction(s) of unknown directionality ==
+
** 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c] '''+''' 1.0 2-Oxoglutarate[c] '''+''' 1.0 H+[c] '''+''' 1.0 L-Glutamine[c] '''=>''' 2.0 L-Glutamate[c] '''+''' 1.0 Nicotinamide adenine dinucleotide phosphate[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[B471_RS0109970]]
 +
** Source: [[orthology-cljungdahlii]]
 +
** Source: [[orthology-bsubtilis]]
 +
** Source: [[orthology-aferrooxidans]]
 +
* Gene: [[B471_RS0105685]]
 +
** Source: [[orthology-cljungdahlii]]
 +
* Gene: [[B471_RS0115910]]
 +
** Source: [[orthology-cljungdahlii]]
 +
* Gene: [[B471_RS0103585]]
 +
** Source: [[orthology-bsubtilis]]
 +
** Source: [[orthology-aferrooxidans]]
 +
== Pathways  ==
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''471''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 +
** '''212''' reactions found over '''1054''' reactions in the full pathway
 +
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 +
** '''101''' reactions found over '''715''' reactions in the full pathway
 +
* [[map00910]]: [http://www.genome.jp/dbget-bin/www_bget?map00910 map00910]
 +
** '''5''' reactions found over '''36''' reactions in the full pathway
 +
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
 +
** '''78''' reactions found over '''228''' reactions in the full pathway
 +
* [[map00250]]: [http://www.genome.jp/dbget-bin/www_bget?map00250 map00250]
 +
** '''22''' reactions found over '''93''' reactions in the full pathway
 +
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 +
** '''148''' reactions found over '''694''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-cljungdahlii]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-bsubtilis]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-aferrooxidans]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[manual]]
 +
** Source: [[manual-reaction_to_add_delete]]
 +
*** Comment: [[reaction added from literature evidence or biological expertise]]
 
== External links  ==
 
== External links  ==
−
{{#set: common name=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol}}
+
* RHEA:
−
{{#set: consumed by=CDPMEK}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15501 15501]
−
{{#set: produced by=MEPCT}}
+
* EC Number : 1.4.1.13
 +
* MetaNetX (MNX) Equation : MNXR100291
 +
* KEGG Reaction : R00114
 +
* BioCyc : META:GLUTAMATESYN-RXN
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=Glutamate synthase (NADPH)}}
 +
{{#set: gene associated=B471_RS0109970|B471_RS0105685|B471_RS0115910|B471_RS0103585}}
 +
{{#set: in pathway=map01100|map01110|map01120|map00910|map01230|map00250|map01130}}
 +
{{#set: reconstruction category=orthology|manual}}
 +
{{#set: reconstruction source=orthology-cljungdahlii|orthology-bsubtilis|orthology-aferrooxidans|manual-reaction_to_add_delete}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction comment=reaction added from literature evidence or biological expertise}}

Latest revision as of 15:40, 21 March 2018

Reaction GLUSy

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Glutamate synthase (NADPH)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c] + 1.0 2-Oxoglutarate[c] + 1.0 H+[c] + 1.0 L-Glutamine[c] => 2.0 L-Glutamate[c] + 1.0 Nicotinamide adenine dinucleotide phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • EC Number : 1.4.1.13
  • MetaNetX (MNX) Equation : MNXR100291
  • KEGG Reaction : R00114
  • BioCyc : META:GLUTAMATESYN-RXN





Retrieved from "http://gem-aureme.irisa.fr/cutigem/index.php?title=GLUSy&oldid=7679"