Difference between revisions of "RBFSb"

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(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/cobalt2 cobalt2] == * common name: ** Co2+ * Synonym(s): == Reaction(s) known to consume the...")
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/RBFSb RBFSb] == * direction: ** LEFT-TO-RIGHT * common name: ** Riboflavin synthase * Synonym(s):...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
== Metabolite [http://bigg.ucsd.edu/universal/metabolites/cobalt2 cobalt2] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/RBFSb RBFSb] ==
 +
* direction:
 +
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** Co2+
+
** Riboflavin synthase
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
* [[SHCHCC_CUT]]
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* With identifiers:
* [[BIOMASS]]
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** 2.0 [[dmlz]][c] '''=>''' 1.0 [[ribflv]][c] '''+''' 1.0 [[4r5au]][c]
* [[COabc]]
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* With common name(s):
== Reaction(s) known to produce the compound ==
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** 2.0 6,7-Dimethyl-8-(1-D-ribityl)lumazine[c] '''=>''' 1.0 Riboflavin C17H20N4O6[c] '''+''' 1.0 4-(1-D-Ribitylamino)-5-aminouracil[c]
* [[COabc]]
+
 
== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
* [[EX_cobalt2]]
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[B471_RS0107785]]
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** Source: [[orthology-bsubtilis]]
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** Source: [[orthology-aferrooxidans]]
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* Gene: [[B471_RS0107775]]
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** Source: [[orthology-bsubtilis]]
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== Pathways  ==
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
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** '''471''' reactions found over '''2349''' reactions in the full pathway
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* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
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** '''212''' reactions found over '''1054''' reactions in the full pathway
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* [[map00740]]: [http://www.genome.jp/dbget-bin/www_bget?map00740 map00740]
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** '''8''' reactions found over '''38''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
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** Source: [[orthology-bsubtilis]]
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*** Tool: [[pantograph]]
 +
** Source: [[orthology-aferrooxidans]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
{{#set: common name=Co2+}}
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* RHEA:
{{#set: consumed by=SHCHCC_CUT|BIOMASS|COabc}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20772 20772]
{{#set: produced by=COabc}}
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* EC Number : 2.5.1.9
{{#set: reversible reaction associated=EX_cobalt2}}
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* MetaNetX (MNX) Equation : MNXR103430
 +
* KEGG Reaction : R00066
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* BioCyc : META:RIBOFLAVIN-SYN-RXN
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=Riboflavin synthase}}
 +
{{#set: gene associated=B471_RS0107785|B471_RS0107775}}
 +
{{#set: in pathway=map01100|map01110|map00740}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-bsubtilis|orthology-aferrooxidans}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:45, 21 March 2018

Reaction RBFSb

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Riboflavin synthase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 2.0 6,7-Dimethyl-8-(1-D-ribityl)lumazine[c] => 1.0 Riboflavin C17H20N4O6[c] + 1.0 4-(1-D-Ribitylamino)-5-aminouracil[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • EC Number : 2.5.1.9
  • MetaNetX (MNX) Equation : MNXR103430
  • KEGG Reaction : R00066
  • BioCyc : META:RIBOFLAVIN-SYN-RXN