Difference between revisions of "Fa5"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/CDGPT_BS CDGPT_BS] == * direction: ** LEFT-TO-RIGHT * common name: ** CDPdiacylglycerolsn glycerol...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ACONTa ACONTa] == * direction: ** REVERSIBLE * common name: ** Aconitase (half-reaction A, Citrate...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/CDGPT_BS CDGPT_BS] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/ACONTa ACONTa] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** CDPdiacylglycerolsn glycerol 3 phosphate 3 phosphatidyltransferase
+
** Aconitase (half-reaction A, Citrate hydro-lyase)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 0.01 [[cdpdag_BS]][c] '''+''' 1.0 [[glyc3p]][c] '''=>''' 1.0 [[cmp]][c] '''+''' 1.0 [[h]][c] '''+''' 0.01 [[pglyp_BS]][c]
+
** 1.0 [[cit]][c] '''<=>''' 1.0 [[h2o]][c] '''+''' 1.0 [[acon_C]][c]
 
* With common name(s):
 
* With common name(s):
−
** 0.01 CDPdiacylglycerol  B subtilis  C4336H7772N300O1500P200[c] '''+''' 1.0 Glycerol 3-phosphate[c] '''=>''' 1.0 CMP C9H12N3O8P[c] '''+''' 1.0 H+[c] '''+''' 0.01 Phosphatidylglycerophosphate  B subtilis  C3736H7172O1300P200[c]
+
** 1.0 Citrate[c] '''<=>''' 1.0 H2O H2O[c] '''+''' 1.0 Cis-Aconitate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[B471_RS0110395]]
+
* [[B471_RS0105965]]
−
** [[pantograph]]-[[bsubtilis]]
+
** [[pantograph]]-[[cljungdahlii]]
 +
** [[pantograph]]-[[aferrooxidans]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''471''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map00630]]: [http://www.genome.jp/dbget-bin/www_bget?map00630 map00630]
 +
** '''23''' reactions found over '''129''' reactions in the full pathway
 +
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 +
** '''212''' reactions found over '''1054''' reactions in the full pathway
 +
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 +
** '''101''' reactions found over '''715''' reactions in the full pathway
 +
* [[map01210]]: [http://www.genome.jp/dbget-bin/www_bget?map01210 map01210]
 +
** '''26''' reactions found over '''80''' reactions in the full pathway
 +
* [[map00720]]: [http://www.genome.jp/dbget-bin/www_bget?map00720 map00720]
 +
** '''25''' reactions found over '''157''' reactions in the full pathway
 +
* [[map00020]]: [http://www.genome.jp/dbget-bin/www_bget?map00020 map00020]
 +
** '''10''' reactions found over '''70''' reactions in the full pathway
 +
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 +
** '''148''' reactions found over '''694''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-cljungdahlii]]
−
*** [[bsubtilis]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-aferrooxidans]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* MetaNetX (MNX) Equation : MNXR96520
+
* RHEA:
−
{{#set: direction=LEFT-TO-RIGHT}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10228 10228]
−
{{#set: common name=CDPdiacylglycerolsn glycerol 3 phosphate 3 phosphatidyltransferase}}
+
* EC Number : 4.2.1.3
−
{{#set: gene associated=B471_RS0110395}}
+
* MetaNetX (MNX) Equation : MNXR95386
−
{{#set: in pathway=}}
+
* KEGG Reaction : R01325
 +
* BioCyc : META:ACONITATEDEHYDR-RXN
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=Aconitase (half-reaction A, Citrate hydro-lyase)}}
 +
{{#set: gene associated=B471_RS0105965}}
 +
{{#set: in pathway=map01100|map00630|map01110|map01120|map01210|map00720|map00020|map01130}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-cljungdahlii|orthology-aferrooxidans}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=bsubtilis}}
 

Revision as of 23:32, 20 March 2018

Reaction ACONTa

  • direction:
    • REVERSIBLE
  • common name:
    • Aconitase (half-reaction A, Citrate hydro-lyase)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Citrate[c] <=> 1.0 H2O H2O[c] + 1.0 Cis-Aconitate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • EC Number : 4.2.1.3
  • MetaNetX (MNX) Equation : MNXR95386
  • KEGG Reaction : R01325
  • BioCyc : META:ACONITATEDEHYDR-RXN




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