Difference between revisions of "Tre6p"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/FACOAL181 FACOAL181] == * direction: ** REVERSIBLE * common name: ** Fatty acid CoA ligase octade...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PSD160 PSD160] == * direction: ** LEFT-TO-RIGHT * common name: ** Phosphatidylserine decarboxylase...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/FACOAL181 FACOAL181] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/PSD160 PSD160] ==
 
* direction:
 
* direction:
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** Fatty acid  CoA ligase  octadecenoate
+
** Phosphatidylserine decarboxylase (n-C16:0)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[atp]][c] '''+''' 1.0 [[ocdcea]][c] '''+''' 1.0 [[coa]][c] '''<=>''' 1.0 [[odecoa]][c] '''+''' 1.0 [[ppi]][c] '''+''' 1.0 [[amp]][c]
+
** 1.0 [[h]][c] '''+''' 1.0 [[ps160]][c] '''=>''' 1.0 [[co2]][c] '''+''' 1.0 [[pe160]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 Octadecenoate (n-C18:1)[c] '''+''' 1.0 Coenzyme A[c] '''<=>''' 1.0 Octadecenoyl-CoA (n-C18:1CoA)[c] '''+''' 1.0 Diphosphate[c] '''+''' 1.0 AMP C10H12N5O7P[c]
+
** 1.0 H+[c] '''+''' 1.0 Phosphatidylserine (dihexadecanoyl, n-C16:0)[c] '''=>''' 1.0 CO2 CO2[c] '''+''' 1.0 Phosphatidylethanolamine (dihexadecanoyl, n-C16:0)[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Genes have been associated with this reaction based on different elements listed below.
 
* [[B471_RS0110780]]
 
** [[pantograph]]-[[bsubtilis]]
 
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''471''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map00564]]: [http://www.genome.jp/dbget-bin/www_bget?map00564 map00564]
 +
** '''36''' reactions found over '''134''' reactions in the full pathway
 +
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 +
** '''212''' reactions found over '''1054''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
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* Category: [[manual]]
** [[pantograph]]:
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** Source: [[manual-reaction_to_add_delete]]
*** [[bsubtilis]]
+
*** Comment: [[reaction added from literature evidence or biological expertise]]
 
== External links  ==
 
== External links  ==
* MetaNetX (MNX) Equation : MNXR99168
+
* MetaNetX (MNX) Equation : MNXR103232
{{#set: direction=REVERSIBLE}}
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* EC Number : 4.1.1.65
{{#set: common name=Fatty acid  CoA ligase  octadecenoate }}
+
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: gene associated=B471_RS0110780}}
+
{{#set: common name=Phosphatidylserine decarboxylase (n-C16:0)}}
{{#set: in pathway=}}
+
{{#set: in pathway=map01100|map00564|map01110}}
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=manual}}
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=manual-reaction_to_add_delete}}
{{#set: reconstruction source=bsubtilis}}
+
{{#set: reconstruction comment=reaction added from literature evidence or biological expertise}}

Revision as of 23:32, 20 March 2018

Reaction PSD160

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Phosphatidylserine decarboxylase (n-C16:0)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 H+[c] + 1.0 Phosphatidylserine (dihexadecanoyl, n-C16:0)[c] => 1.0 CO2 CO2[c] + 1.0 Phosphatidylethanolamine (dihexadecanoyl, n-C16:0)[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR103232
  • EC Number : 4.1.1.65