Difference between revisions of "Dcal"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/DPR DPR] == * direction: ** LEFT-TO-RIGHT * common name: ** 2-dehydropantoate 2-reductase * Synonym...") |
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/OCTDPS OCTDPS] == * direction: ** LEFT-TO-RIGHT * common name: ** Octaprenyl pyrophosphate synthase...") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://bigg.ucsd.edu/universal/reactions/ | + | == Reaction [http://bigg.ucsd.edu/universal/reactions/OCTDPS OCTDPS] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
| − | ** | + | ** Octaprenyl pyrophosphate synthase |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1.0 [[ | + | ** 1.0 [[frdp]][c] '''+''' 5.0 [[ipdp]][c] '''=>''' 5.0 [[ppi]][c] '''+''' 1.0 [[octdp]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1.0 | + | ** 1.0 Farnesyl diphosphate[c] '''+''' 5.0 Isopentenyl diphosphate[c] '''=>''' 5.0 Diphosphate[c] '''+''' 1.0 All-trans-Octaprenyl diphosphate[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[ | + | * [[B471_RS0105645]] |
| − | + | ||
| − | + | ||
| − | + | ||
| − | + | ||
** [[pantograph]]-[[cljungdahlii]] | ** [[pantograph]]-[[cljungdahlii]] | ||
| + | ** [[pantograph]]-[[aferrooxidans]] | ||
== Pathways == | == Pathways == | ||
| − | |||
| − | |||
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110] | * [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110] | ||
** '''212''' reactions found over '''1054''' reactions in the full pathway | ** '''212''' reactions found over '''1054''' reactions in the full pathway | ||
| − | * [[ | + | * [[map00900]]: [http://www.genome.jp/dbget-bin/www_bget?map00900 map00900] |
| − | ** ''' | + | ** '''16''' reactions found over '''67''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
| − | * [[orthology]]: | + | * Category: [[orthology]] |
| − | ** [[pantograph]] | + | ** Source: [[orthology-cljungdahlii]] |
| − | ** | + | *** Tool: [[pantograph]] |
| − | *** [[ | + | ** Source: [[orthology-aferrooxidans]] |
| + | *** Tool: [[pantograph]] | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27798 27798] |
| − | * | + | * EC Number : 2.5.1.90 |
| − | * MetaNetX (MNX) Equation : | + | * MetaNetX (MNX) Equation : MNXR102153 |
| − | * KEGG Reaction : | + | * KEGG Reaction : R09248 |
| − | * | + | * BioCyc : META:RXN-8992 |
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | {{#set: common name= | + | {{#set: common name=Octaprenyl pyrophosphate synthase}} |
| − | {{#set: gene associated= | + | {{#set: gene associated=B471_RS0105645}} |
| − | {{#set: in pathway= | + | {{#set: in pathway=map01110|map00900}} |
{{#set: reconstruction category=orthology}} | {{#set: reconstruction category=orthology}} | ||
| + | {{#set: reconstruction source=orthology-cljungdahlii|orthology-aferrooxidans}} | ||
{{#set: reconstruction tool=pantograph}} | {{#set: reconstruction tool=pantograph}} | ||
| − | |||
Revision as of 00:33, 21 March 2018
Contents
Reaction OCTDPS
- direction:
- LEFT-TO-RIGHT
- common name:
- Octaprenyl pyrophosphate synthase
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1.0 Farnesyl diphosphate[c] + 5.0 Isopentenyl diphosphate[c] => 5.0 Diphosphate[c] + 1.0 All-trans-Octaprenyl diphosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
Pathways
- map01110: map01110
- 212 reactions found over 1054 reactions in the full pathway
- map00900: map00900
- 16 reactions found over 67 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-cljungdahlii
- Tool: pantograph
- Source: orthology-aferrooxidans
- Tool: pantograph
- Source: orthology-cljungdahlii
External links
- RHEA:
- EC Number : 2.5.1.90
- MetaNetX (MNX) Equation : MNXR102153
- KEGG Reaction : R09248
- BioCyc : META:RXN-8992
