Difference between revisions of "Ttdcap"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/CHORS CHORS] == * direction: ** LEFT-TO-RIGHT * common name: ** Chorismate synthase * Synonym(s):...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/DTMPK DTMPK] == * direction: ** REVERSIBLE * common name: ** DTMP kinase * Synonym(s): == Reaction...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/CHORS CHORS] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/DTMPK DTMPK] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** Chorismate synthase
+
** DTMP kinase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[3psme]][c] '''=>''' 1.0 [[chor]][c] '''+''' 1.0 [[pi]][c]
+
** 1.0 [[dtmp]][c] '''+''' 1.0 [[atp]][c] '''<=>''' 1.0 [[dtdp]][c] '''+''' 1.0 [[adp]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 5-O-(1-Carboxyvinyl)-3-phosphoshikimate[c] '''=>''' 1.0 Chorismate[c] '''+''' 1.0 Phosphate[c]
+
** 1.0 DTMP C10H13N2O8P[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''<=>''' 1.0 DTDP C10H13N2O11P2[c] '''+''' 1.0 ADP C10H12N5O10P2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[B471_RS0101965]]
+
* [[B471_RS0107285]]
−
** [[pantograph]]-[[cljungdahlii]]
+
 
** [[pantograph]]-[[bsubtilis]]
 
** [[pantograph]]-[[bsubtilis]]
 
** [[pantograph]]-[[aferrooxidans]]
 
** [[pantograph]]-[[aferrooxidans]]
 +
* [[B471_RS0101685]]
 +
** [[pantograph]]-[[cljungdahlii]]
 +
* [[B471_RS20290]]
 +
** [[pantograph]]-[[cljungdahlii]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
 +
** '''68''' reactions found over '''244''' reactions in the full pathway
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
−
** '''472''' reactions found over '''2349''' reactions in the full pathway
+
** '''471''' reactions found over '''2349''' reactions in the full pathway
−
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
+
−
** '''148''' reactions found over '''694''' reactions in the full pathway
+
−
* [[map00400]]: [http://www.genome.jp/dbget-bin/www_bget?map00400 map00400]
+
−
** '''17''' reactions found over '''59''' reactions in the full pathway
+
−
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
+
−
** '''212''' reactions found over '''1054''' reactions in the full pathway
+
−
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
+
−
** '''78''' reactions found over '''228''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-cljungdahlii]]
−
*** [[aferrooxidans]]
+
*** Tool: [[pantograph]]
−
*** [[cljungdahlii]]
+
** Source: [[orthology-bsubtilis]]
−
*** [[bsubtilis]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-aferrooxidans]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21020 21020]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13517 13517]
−
* BioCyc : META:CHORISMATE-SYNTHASE-RXN
+
* EC Number : 2.7.4.12
−
* MetaNetX (MNX) Equation : MNXR96709
+
* MetaNetX (MNX) Equation : MNXR97804
−
* KEGG Reaction : R01714
+
* KEGG Reaction : R02094
−
* EC Number : 4.2.3.5
+
* BioCyc : META:DTMPKI-RXN
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=Chorismate synthase}}
+
{{#set: common name=DTMP kinase}}
−
{{#set: gene associated=B471_RS0101965}}
+
{{#set: gene associated=B471_RS0107285|B471_RS0101685|B471_RS20290}}
−
{{#set: in pathway=map01100|map01130|map00400|map01110|map01230}}
+
{{#set: in pathway=map00240|map01100}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-cljungdahlii|orthology-bsubtilis|orthology-aferrooxidans}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=aferrooxidans|cljungdahlii|bsubtilis}}
 

Revision as of 23:34, 20 March 2018

Reaction DTMPK

  • direction:
    • REVERSIBLE
  • common name:
    • DTMP kinase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 DTMP C10H13N2O8P[c] + 1.0 ATP C10H12N5O13P3[c] <=> 1.0 DTDP C10H13N2O11P2[c] + 1.0 ADP C10H12N5O10P2[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • EC Number : 2.7.4.12
  • MetaNetX (MNX) Equation : MNXR97804
  • KEGG Reaction : R02094
  • BioCyc : META:DTMPKI-RXN




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