Difference between revisions of "3cmp"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GLUDxi_CUT GLUDxi_CUT] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * Wit...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/FACOAL140 FACOAL140] == * direction: ** REVERSIBLE * common name: ** Fatty acid CoA ligase tetrad...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/GLUDxi_CUT GLUDxi_CUT] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/FACOAL140 FACOAL140] ==
 
* direction:
 
* direction:
** LEFT-TO-RIGHT
+
** REVERSIBLE
 +
* common name:
 +
** Fatty acid  CoA ligase  tetradecanoate
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[glu__L]][c] '''+''' 1.0 [[nad]][c] '''+''' 1.0 [[h2o]][c] '''=>''' 1.0 [[h]][c] '''+''' 1.0 [[akg]][c] '''+''' 1.0 [[nadh]][c] '''+''' 1.0 [[nh4]][c]
+
** 1.0 [[coa]][c] '''+''' 1.0 [[ttdca]][c] '''+''' 1.0 [[atp]][c] '''<=>''' 1.0 [[ppi]][c] '''+''' 1.0 [[tdcoa]][c] '''+''' 1.0 [[amp]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 L-Glutamate[c] '''+''' 1.0 Nicotinamide adenine dinucleotide[c] '''+''' 1.0 H2O H2O[c] '''=>''' 1.0 H+[c] '''+''' 1.0 2-Oxoglutarate[c] '''+''' 1.0 Nicotinamide adenine dinucleotide - reduced[c] '''+''' 1.0 Ammonium[c]
+
** 1.0 Coenzyme A[c] '''+''' 1.0 Tetradecanoate (n-C14:0)[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''<=>''' 1.0 Diphosphate[c] '''+''' 1.0 Tetradecanoyl-CoA (n-C14:0CoA)[c] '''+''' 1.0 AMP C10H12N5O7P[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[B471_RS0108910]]
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* [[B471_RS0110780]]
** MANUAL
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** [[pantograph]]-[[bsubtilis]]
 +
* [[B471_RS22560]]
 +
** [[pantograph]]-[[cljungdahlii]]
 
== Pathways  ==
 
== Pathways  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[manual]]:
+
* Category: [[orthology]]
** [[reaction found from orthology but we fixed reversibility based on biological expertise]]
+
** Source: [[orthology-cljungdahlii]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-bsubtilis]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
+
* MetaNetX (MNX) Equation : MNXR99145
{{#set: gene associated=B471_RS0108910}}
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{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=Fatty acid  CoA ligase  tetradecanoate }}
 +
{{#set: gene associated=B471_RS0110780|B471_RS22560}}
 
{{#set: in pathway=}}
 
{{#set: in pathway=}}
{{#set: reconstruction category=manual}}
+
{{#set: reconstruction category=orthology}}
{{#set: reconstruction source=reaction found from orthology but we fixed reversibility based on biological expertise}}
+
{{#set: reconstruction source=orthology-cljungdahlii|orthology-bsubtilis}}
 +
{{#set: reconstruction tool=pantograph}}

Revision as of 23:34, 20 March 2018

Reaction FACOAL140

  • direction:
    • REVERSIBLE
  • common name:
    • Fatty acid CoA ligase tetradecanoate
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Coenzyme A[c] + 1.0 Tetradecanoate (n-C14:0)[c] + 1.0 ATP C10H12N5O13P3[c] <=> 1.0 Diphosphate[c] + 1.0 Tetradecanoyl-CoA (n-C14:0CoA)[c] + 1.0 AMP C10H12N5O7P[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR99145