Difference between revisions of "PYRt2"

Revision as of 23:08, 9 January 2018

Reaction SDPDS

• direction:
  • LEFT-TO-RIGHT
• common name:
  • Succinyl-diaminopimelate desuccinylase
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1.0 h2o[c] + 1.0 sl26da[c] => 1.0 succ[c] + 1.0 26dap_LL[c]
• With common name(s):
  • 1.0 H2O H2O[c] + 1.0 N-Succinyl-LL-2,6-diaminoheptanedioate[c] => 1.0 Succinate[c] + 1.0 LL-2,6-Diaminoheptanedioate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• B471_RS0118440
  • pantograph-bsubtilis
• B471_RS0119375
  • pantograph-aferrooxidans

Pathways

• map01100: map01100
  • 472 reactions found over 2349 reactions in the full pathway
• map01120: map01120
  • 101 reactions found over 715 reactions in the full pathway
• map00300: map00300
  • 10 reactions found over 34 reactions in the full pathway
• map01230: map01230
  • 78 reactions found over 228 reactions in the full pathway

Reconstruction information

• orthology:
  • pantograph:
    • aferrooxidans
    • bsubtilis

External links

• RHEA:
  • 22608
• BioCyc : META:SUCCDIAMINOPIMDESUCC-RXN
• MetaNetX (MNX) Equation : MNXR104300
• KEGG Reaction : R02734
• EC Number : 3.5.1.18