Difference between revisions of "Pre4"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ARBt2r ARBt2r] == * direction: ** REVERSIBLE * common name: ** L-arabinose transport via proton sym...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PRAMPC PRAMPC] == * direction: ** LEFT-TO-RIGHT * common name: ** Phosphoribosyl-AMP cyclohydrolase...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/ARBt2r ARBt2r] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/PRAMPC PRAMPC] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** L-arabinose transport via proton symport
+
** Phosphoribosyl-AMP cyclohydrolase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[h]][e] '''+''' 1.0 [[arab__L]][e] '''<=>''' 1.0 [[arab__L]][c] '''+''' 1.0 [[h]][c]
+
** 1.0 [[h2o]][c] '''+''' 1.0 [[prbamp]][c] '''=>''' 1.0 [[prfp]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 H+[e] '''+''' 1.0 L-Arabinose[e] '''<=>''' 1.0 L-Arabinose[c] '''+''' 1.0 H+[c]
+
** 1.0 H2O H2O[c] '''+''' 1.0 1-(5-Phosphoribosyl)-AMP[c] '''=>''' 1.0 1-(5-Phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[B471_RS0110805]]
 
−
** [[pantograph]]-[[bsubtilis]]
 
−
* [[B471_RS0106090]]
 
−
** [[pantograph]]-[[cljungdahlii]]
 
−
* [[B471_RS0115410]]
 
−
** [[pantograph]]-[[bsubtilis]]
 
−
* [[B471_RS0110960]]
 
−
** [[pantograph]]-[[bsubtilis]]
 
−
* [[B471_RS0111265]]
 
−
** [[pantograph]]-[[bsubtilis]]
 
−
* [[B471_RS0103740]]
 
−
** [[pantograph]]-[[bsubtilis]]
 
−
* [[B471_RS0106155]]
 
−
** [[pantograph]]-[[bsubtilis]]
 
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''471''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map00340]]: [http://www.genome.jp/dbget-bin/www_bget?map00340 map00340]
 +
** '''13''' reactions found over '''90''' reactions in the full pathway
 +
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 +
** '''212''' reactions found over '''1054''' reactions in the full pathway
 +
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
 +
** '''78''' reactions found over '''228''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[manual]]
−
** [[pantograph]]:
+
** Source: [[manual-reaction_to_add_delete]]
−
*** [[cljungdahlii]]
+
*** Comment: [[reaction added from literature evidence or biological expertise]]
−
*** [[bsubtilis]]
+
 
== External links  ==
 
== External links  ==
−
* MetaNetX (MNX) Equation : MNXR95936
+
* RHEA:
−
* BioCyc : META:TRANS-RXN-10
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20049 20049]
−
{{#set: direction=REVERSIBLE}}
+
* BioCyc : META:HISTCYCLOHYD-RXN
−
{{#set: common name=L-arabinose transport via proton symport}}
+
* MetaNetX (MNX) Equation : MNXR103154
−
{{#set: gene associated=B471_RS0110805|B471_RS0106090|B471_RS0115410|B471_RS0110960|B471_RS0111265|B471_RS0103740|B471_RS0106155}}
+
* KEGG Reaction : R04037
−
{{#set: in pathway=}}
+
* EC Number : 3.5.4.19
−
{{#set: reconstruction category=orthology}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: common name=Phosphoribosyl-AMP cyclohydrolase}}
−
{{#set: reconstruction source=cljungdahlii|bsubtilis}}
+
{{#set: in pathway=map01100|map00340|map01110|map01230}}
 +
{{#set: reconstruction category=manual}}
 +
{{#set: reconstruction source=manual-reaction_to_add_delete}}
 +
{{#set: reconstruction comment=reaction added from literature evidence or biological expertise}}

Revision as of 23:32, 20 March 2018

Reaction PRAMPC

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Phosphoribosyl-AMP cyclohydrolase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 H2O H2O[c] + 1.0 1-(5-Phosphoribosyl)-AMP[c] => 1.0 1-(5-Phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:HISTCYCLOHYD-RXN
  • MetaNetX (MNX) Equation : MNXR103154
  • KEGG Reaction : R04037
  • EC Number : 3.5.4.19




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