Difference between revisions of "Adp"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/MDDCP5ex MDDCP5ex] == * direction: ** LEFT-TO-RIGHT * common name: ** Murein D,D-carboxypeptidase (...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/UCMAT_AFE UCMAT_AFE] == * direction: ** LEFT-TO-RIGHT * common name: ** undecaprenyldiphospho-muram...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/MDDCP5ex MDDCP5ex] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/UCMAT_AFE UCMAT_AFE] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** Murein D,D-carboxypeptidase (murein5p3p) (periplasm)
+
** undecaprenyldiphospho-muramoylpentapeptide ?-N-acetylglucosaminyltransferase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[murein5p3p]][e] '''+''' 1.0 [[h2o]][e] '''=>''' 1.0 [[ala__D]][e] '''+''' 1.0 [[murein4p3p]][e]
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** 1.0 [[uagmda]][c] '''+''' 1.0 [[uacgam]][c] '''=>''' 1.0 [[ugmdal]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[udp]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 Two linked disacharide pentapeptide and tripeptide murein units (uncrosslinked, middle of chain)[e] '''+''' 1.0 H2O H2O[e] '''=>''' 1.0 D-Alanine[e] '''+''' 1.0 Two linked disacharide tetrapeptide and tripeptide murein units (uncrosslinked, middle of chain)[e]
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** 1.0 Undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine[c] '''+''' 1.0 UDP-N-acetyl-D-glucosamine[c] '''=>''' 1.0 Undecaprenyl-diphospho-N-acetylmuramoyl-L-ala-D-glu-meso-2,6-diaminopimeloyl-D-ala-D-ala[c] '''+''' 1.0 H+[c] '''+''' 1.0 UDP C9H11N2O12P2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[B471_RS0101180]]
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* [[B471_RS0108990]]
** [[pantograph]]-[[cljungdahlii]]
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** [[pantograph]]-[[aferrooxidans]]
 
== Pathways  ==
 
== Pathways  ==
* [[map00550]]: [http://www.genome.jp/dbget-bin/www_bget?map00550 map00550]
 
** '''14''' reactions found over '''27''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
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* Category: [[orthology]]
** [[pantograph]]:
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** Source: [[orthology-aferrooxidans]]
*** [[cljungdahlii]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
* MetaNetX (MNX) Equation : MNXR101433
 
* EC Number : 3.4.16.4
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=Murein D,D-carboxypeptidase (murein5p3p) (periplasm)}}
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{{#set: common name=undecaprenyldiphospho-muramoylpentapeptide ?-N-acetylglucosaminyltransferase}}
{{#set: gene associated=B471_RS0101180}}
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{{#set: gene associated=B471_RS0108990}}
{{#set: in pathway=map00550}}
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{{#set: in pathway=}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-aferrooxidans}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction source=cljungdahlii}}
 

Revision as of 00:33, 21 March 2018

Reaction UCMAT_AFE

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • undecaprenyldiphospho-muramoylpentapeptide ?-N-acetylglucosaminyltransferase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine[c] + 1.0 UDP-N-acetyl-D-glucosamine[c] => 1.0 Undecaprenyl-diphospho-N-acetylmuramoyl-L-ala-D-glu-meso-2,6-diaminopimeloyl-D-ala-D-ala[c] + 1.0 H+[c] + 1.0 UDP C9H11N2O12P2[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links