Difference between revisions of "3hddcoa"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ECOAH4 ECOAH4] == * direction: ** REVERSIBLE * common name: ** 3-hydroxyacyl-CoA dehydratase (3-hyd...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ICDHyr ICDHyr] == * direction: ** REVERSIBLE * common name: ** Isocitrate dehydrogenase (NADP) * Sy...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/ECOAH4 ECOAH4] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/ICDHyr ICDHyr] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
 
* common name:
 
* common name:
−
** 3-hydroxyacyl-CoA dehydratase (3-hydroxydecanoyl-CoA)
+
** Isocitrate dehydrogenase (NADP)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[3hdcoa]][c] '''<=>''' 1.0 [[dc2coa]][c] '''+''' 1.0 [[h2o]][c]
+
** 1.0 [[nadp]][c] '''+''' 1.0 [[icit]][c] '''<=>''' 1.0 [[akg]][c] '''+''' 1.0 [[co2]][c] '''+''' 1.0 [[nadph]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 (S)-3-Hydroxydecanoyl-CoA[c] '''<=>''' 1.0 Trans-Dec-2-enoyl-CoA[c] '''+''' 1.0 H2O H2O[c]
+
** 1.0 Nicotinamide adenine dinucleotide phosphate[c] '''+''' 1.0 Isocitrate[c] '''<=>''' 1.0 2-Oxoglutarate[c] '''+''' 1.0 CO2 CO2[c] '''+''' 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[B471_RS0115580]]
 
−
** [[pantograph]]-[[bsubtilis]]
 
−
* [[B471_RS0110785]]
 
−
** [[pantograph]]-[[bsubtilis]]
 
 
== Pathways  ==
 
== Pathways  ==
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
−
** '''472''' reactions found over '''2349''' reactions in the full pathway
+
** '''471''' reactions found over '''2349''' reactions in the full pathway
−
* [[map01212]]: [http://www.genome.jp/dbget-bin/www_bget?map01212 map01212]
+
* [[map00480]]: [http://www.genome.jp/dbget-bin/www_bget?map00480 map00480]
−
** '''43''' reactions found over '''182''' reactions in the full pathway
+
** '''10''' reactions found over '''39''' reactions in the full pathway
−
* [[map00071]]: [http://www.genome.jp/dbget-bin/www_bget?map00071 map00071]
+
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
−
** '''17''' reactions found over '''167''' reactions in the full pathway
+
** '''212''' reactions found over '''1054''' reactions in the full pathway
−
* [[map00062]]: [http://www.genome.jp/dbget-bin/www_bget?map00062 map00062]
+
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
−
** '''11''' reactions found over '''111''' reactions in the full pathway
+
** '''101''' reactions found over '''715''' reactions in the full pathway
 +
* [[map01210]]: [http://www.genome.jp/dbget-bin/www_bget?map01210 map01210]
 +
** '''26''' reactions found over '''80''' reactions in the full pathway
 +
* [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200]
 +
** '''51''' reactions found over '''220''' reactions in the full pathway
 +
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
 +
** '''78''' reactions found over '''228''' reactions in the full pathway
 +
* [[map00020]]: [http://www.genome.jp/dbget-bin/www_bget?map00020 map00020]
 +
** '''10''' reactions found over '''70''' reactions in the full pathway
 +
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 +
** '''148''' reactions found over '''694''' reactions in the full pathway
 +
* [[map00720]]: [http://www.genome.jp/dbget-bin/www_bget?map00720 map00720]
 +
** '''25''' reactions found over '''157''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[manual]]
−
** [[pantograph]]:
+
** Source: [[manual-reaction_to_add_delete]]
−
*** [[bsubtilis]]
+
*** Comment: [[reaction added from literature evidence or biological expertise]]
 
== External links  ==
 
== External links  ==
−
* EC Number : 4.2.1.17
 
−
* BioCyc : META:RXN-13616
 
−
* MetaNetX (MNX) Equation : MNXR97889
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31191 31191]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19629 19629]
−
* Reactome : REACT_R-BTA-77344
+
* MetaNetX (MNX) Equation : MNXR100781
−
* KEGG Reaction : R04744
+
* KEGG Reaction : R00267
 +
* EC Number : 1.1.1.42
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=3-hydroxyacyl-CoA dehydratase (3-hydroxydecanoyl-CoA)}}
+
{{#set: common name=Isocitrate dehydrogenase (NADP)}}
−
{{#set: gene associated=B471_RS0115580|B471_RS0110785}}
+
{{#set: in pathway=map01100|map00480|map01110|map01120|map01210|map01200|map01230|map00020|map01130|map00720}}
−
{{#set: in pathway=map01100|map01212|map00071|map00062}}
+
{{#set: reconstruction category=manual}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction source=manual-reaction_to_add_delete}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction comment=reaction added from literature evidence or biological expertise}}
−
{{#set: reconstruction source=bsubtilis}}
+

Revision as of 23:33, 20 March 2018

Reaction ICDHyr

  • direction:
    • REVERSIBLE
  • common name:
    • Isocitrate dehydrogenase (NADP)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Nicotinamide adenine dinucleotide phosphate[c] + 1.0 Isocitrate[c] <=> 1.0 2-Oxoglutarate[c] + 1.0 CO2 CO2[c] + 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links

  • RHEA:
  • MetaNetX (MNX) Equation : MNXR100781
  • KEGG Reaction : R00267
  • EC Number : 1.1.1.42




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