Difference between revisions of "Pglyp BS"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ACOATA ACOATA] == * direction: ** REVERSIBLE * common name: ** Acetyl-CoA ACP transacylase * Synony...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/OCBT OCBT] == * direction: ** REVERSIBLE * common name: ** Ornithine carbamoyltransferase * Synonym...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/ACOATA ACOATA] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/OCBT OCBT] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
 
* common name:
 
* common name:
−
** Acetyl-CoA ACP transacylase
+
** Ornithine carbamoyltransferase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[ACP]][c] '''+''' 1.0 [[accoa]][c] '''<=>''' 1.0 [[coa]][c] '''+''' 1.0 [[acACP]][c]
+
** 1.0 [[cbp]][c] '''+''' 1.0 [[orn]][c] '''<=>''' 1.0 [[pi]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[citr__L]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 Acyl carrier protein[c] '''+''' 1.0 Acetyl-CoA[c] '''<=>''' 1.0 Coenzyme A[c] '''+''' 1.0 Acetyl-ACP[c]
+
** 1.0 Carbamoyl phosphate[c] '''+''' 1.0 Ornithine[c] '''<=>''' 1.0 Phosphate[c] '''+''' 1.0 H+[c] '''+''' 1.0 L-Citrulline[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[B471_RS0109645]]
+
* [[B471_RS0119565]]
−
** [[pantograph]]-[[cljungdahlii]]
+
−
* [[B471_RS0109630]]
+
 
** [[pantograph]]-[[cljungdahlii]]
 
** [[pantograph]]-[[cljungdahlii]]
 +
** [[pantograph]]-[[aferrooxidans]]
 
== Pathways  ==
 
== Pathways  ==
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
−
** '''472''' reactions found over '''2349''' reactions in the full pathway
+
** '''471''' reactions found over '''2349''' reactions in the full pathway
−
* [[map01212]]: [http://www.genome.jp/dbget-bin/www_bget?map01212 map01212]
+
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
−
** '''43''' reactions found over '''182''' reactions in the full pathway
+
** '''148''' reactions found over '''694''' reactions in the full pathway
−
* [[map00061]]: [http://www.genome.jp/dbget-bin/www_bget?map00061 map00061]
+
* [[map00220]]: [http://www.genome.jp/dbget-bin/www_bget?map00220 map00220]
−
** '''54''' reactions found over '''160''' reactions in the full pathway
+
** '''13''' reactions found over '''65''' reactions in the full pathway
 +
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 +
** '''212''' reactions found over '''1054''' reactions in the full pathway
 +
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
 +
** '''78''' reactions found over '''228''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-cljungdahlii]]
−
*** [[cljungdahlii]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-aferrooxidans]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* BioCyc : META:ACP-S-ACETYLTRANSFER-RXN
+
* EC Number : 2.1.3.3
−
* MetaNetX (MNX) Equation : MNXR95376
+
* BioCyc : META:ORNCARBAMTRANSFER-RXN
−
* KEGG Reaction : R01624
+
* MetaNetX (MNX) Equation : MNXR102137
−
* EC Number : 2.3.1.-
+
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19513 19513]
 +
* Reactome : REACT_R-ATH-70560
 +
* KEGG Reaction : R01398
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=Acetyl-CoA ACP transacylase}}
+
{{#set: common name=Ornithine carbamoyltransferase}}
−
{{#set: gene associated=B471_RS0109645|B471_RS0109630}}
+
{{#set: gene associated=B471_RS0119565}}
−
{{#set: in pathway=map01100|map01212|map00061}}
+
{{#set: in pathway=map01100|map01130|map00220|map01110|map01230}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-cljungdahlii|orthology-aferrooxidans}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=cljungdahlii}}
 

Revision as of 23:33, 20 March 2018

Reaction OCBT

  • direction:
    • REVERSIBLE
  • common name:
    • Ornithine carbamoyltransferase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Carbamoyl phosphate[c] + 1.0 Ornithine[c] <=> 1.0 Phosphate[c] + 1.0 H+[c] + 1.0 L-Citrulline[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • EC Number : 2.1.3.3
  • BioCyc : META:ORNCARBAMTRANSFER-RXN
  • MetaNetX (MNX) Equation : MNXR102137
  • RHEA:
  • Reactome : REACT_R-ATH-70560
  • KEGG Reaction : R01398




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