Difference between revisions of "Ribflv"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GAPD GAPD] == * direction: ** REVERSIBLE * common name: ** Glyceraldehyde-3-phosphate dehydrogenase...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/LYSt2r LYSt2r] == * direction: ** REVERSIBLE * common name: ** L lysine reversible transport via pr...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/GAPD GAPD] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/LYSt2r LYSt2r] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
 
* common name:
 
* common name:
−
** Glyceraldehyde-3-phosphate dehydrogenase
+
** L lysine reversible transport via proton symport
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[nad]][c] '''+''' 1.0 [[g3p]][c] '''+''' 1.0 [[pi]][c] '''<=>''' 1.0 [[h]][c] '''+''' 1.0 [[nadh]][c] '''+''' 1.0 [[13dpg]][c]
+
** 1.0 [[h]][e] '''+''' 1.0 [[lys__L]][e] '''<=>''' 1.0 [[h]][c] '''+''' 1.0 [[lys__L]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 Nicotinamide adenine dinucleotide[c] '''+''' 1.0 Glyceraldehyde 3-phosphate[c] '''+''' 1.0 Phosphate[c] '''<=>''' 1.0 H+[c] '''+''' 1.0 Nicotinamide adenine dinucleotide - reduced[c] '''+''' 1.0 3-Phospho-D-glyceroyl phosphate[c]
+
** 1.0 H+[e] '''+''' 1.0 L-Lysine[e] '''<=>''' 1.0 H+[c] '''+''' 1.0 L-Lysine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[B471_RS0119330]]
+
* [[B471_RS0105160]]
 +
** [[pantograph]]-[[cljungdahlii]]
 +
* [[B471_RS0101195]]
 
** [[pantograph]]-[[cljungdahlii]]
 
** [[pantograph]]-[[cljungdahlii]]
−
** [[pantograph]]-[[bsubtilis]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
−
** '''472''' reactions found over '''2349''' reactions in the full pathway
 
−
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 
−
** '''212''' reactions found over '''1054''' reactions in the full pathway
 
−
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 
−
** '''101''' reactions found over '''715''' reactions in the full pathway
 
−
* [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200]
 
−
** '''51''' reactions found over '''220''' reactions in the full pathway
 
−
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
 
−
** '''78''' reactions found over '''228''' reactions in the full pathway
 
−
* [[map00010]]: [http://www.genome.jp/dbget-bin/www_bget?map00010 map00010]
 
−
** '''20''' reactions found over '''149''' reactions in the full pathway
 
−
* [[map00710]]: [http://www.genome.jp/dbget-bin/www_bget?map00710 map00710]
 
−
** '''18''' reactions found over '''71''' reactions in the full pathway
 
−
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
−
** '''148''' reactions found over '''694''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-cljungdahlii]]
−
*** [[cljungdahlii]]
+
*** Tool: [[pantograph]]
−
*** [[bsubtilis]]
+
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10300 10300]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28911 28911]
−
* BioCyc : META:GAPOXNPHOSPHN-RXN
+
* MetaNetX (MNX) Equation : MNXR101266
−
* MetaNetX (MNX) Equation : MNXR100040
+
* BioCyc : META:TRANS-RXN-58
−
* KEGG Reaction : R01061
+
−
* EC Number : 1.2.1.12
+
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=Glyceraldehyde-3-phosphate dehydrogenase}}
+
{{#set: common name=L lysine reversible transport via proton symport}}
−
{{#set: gene associated=B471_RS0119330}}
+
{{#set: gene associated=B471_RS0105160|B471_RS0101195}}
−
{{#set: in pathway=map01100|map01110|map01120|map01200|map01230|map00010|map00710|map01130}}
+
{{#set: in pathway=}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-cljungdahlii}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=cljungdahlii|bsubtilis}}
 

Revision as of 23:34, 20 March 2018

Reaction LYSt2r

  • direction:
    • REVERSIBLE
  • common name:
    • L lysine reversible transport via proton symport
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 H+[e] + 1.0 L-Lysine[e] <=> 1.0 H+[c] + 1.0 L-Lysine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • MetaNetX (MNX) Equation : MNXR101266
  • BioCyc : META:TRANS-RXN-58




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