Difference between revisions of "Pg180"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/MTRI MTRI] == * direction: ** REVERSIBLE * common name: ** 5-methylthioribose-1-phosphate isomerase...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GTPCII GTPCII] == * direction: ** LEFT-TO-RIGHT * common name: ** GTP cyclohydrolase II * Synonym(s...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/MTRI MTRI] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/GTPCII GTPCII] ==
 
* direction:
 
* direction:
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** 5-methylthioribose-1-phosphate isomerase
+
** GTP cyclohydrolase II
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[5mdr1p]][c] '''<=>''' 1.0 [[5mdru1p]][c]
+
** 1.0 [[gtp]][c] '''+''' 3.0 [[h2o]][c] '''=>''' 1.0 [[25dhpp]][c] '''+''' 1.0 [[for]][c] '''+''' 2.0 [[h]][c] '''+''' 1.0 [[ppi]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 5-Methylthio-5-deoxy-D-ribose 1-phosphate[c] '''<=>''' 1.0 5-Methylthio-5-deoxy-D-ribulose 1-phosphate[c]
+
** 1.0 GTP C10H12N5O14P3[c] '''+''' 3.0 H2O H2O[c] '''=>''' 1.0 2 5 Diamino 6 hydroxy 4  5 phosphoribosylamino  pyrimidine C9H14N5O8P[c] '''+''' 1.0 Formate[c] '''+''' 2.0 H+[c] '''+''' 1.0 Diphosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[B471_RS0112260]]
+
* [[B471_RS0107780]]
 +
** [[pantograph]]-[[cljungdahlii]]
 
** [[pantograph]]-[[bsubtilis]]
 
** [[pantograph]]-[[bsubtilis]]
 
** [[pantograph]]-[[aferrooxidans]]
 
** [[pantograph]]-[[aferrooxidans]]
 
== Pathways  ==
 
== Pathways  ==
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''472''' reactions found over '''2349''' reactions in the full pathway
 
* [[map00270]]: [http://www.genome.jp/dbget-bin/www_bget?map00270 map00270]
 
** '''24''' reactions found over '''135''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
+
* Category: [[orthology]]
** [[pantograph]]:
+
** Source: [[orthology-cljungdahlii]]
*** [[aferrooxidans]]
+
*** Tool: [[pantograph]]
*** [[bsubtilis]]
+
** Source: [[orthology-bsubtilis]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-aferrooxidans]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
* EC Number : 5.3.1.23
+
* MetaNetX (MNX) Equation : MNXR100454
* BioCyc : META:5.3.1.23-RXN
+
{{#set: direction=LEFT-TO-RIGHT}}
* MetaNetX (MNX) Equation : MNXR101759
+
{{#set: common name=GTP cyclohydrolase II}}
* RHEA:
+
{{#set: gene associated=B471_RS0107780}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19989 19989]
+
{{#set: in pathway=}}
* Reactome : REACT_R-ATH-1237096
+
* KEGG Reaction : R04420
+
{{#set: direction=REVERSIBLE}}
+
{{#set: common name=5-methylthioribose-1-phosphate isomerase}}
+
{{#set: gene associated=B471_RS0112260}}
+
{{#set: in pathway=map01100|map00270}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-cljungdahlii|orthology-bsubtilis|orthology-aferrooxidans}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
{{#set: reconstruction source=aferrooxidans|bsubtilis}}
 

Revision as of 23:34, 20 March 2018

Reaction GTPCII

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • GTP cyclohydrolase II
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 GTP C10H12N5O14P3[c] + 3.0 H2O H2O[c] => 1.0 2 5 Diamino 6 hydroxy 4 5 phosphoribosylamino pyrimidine C9H14N5O8P[c] + 1.0 Formate[c] + 2.0 H+[c] + 1.0 Diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR100454