Difference between revisions of "Thmmp"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/DADA DADA] == * direction: ** LEFT-TO-RIGHT * common name: ** Deoxyadenosine deaminase * Synonym(s)...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PSP_L PSP_L] == * direction: ** LEFT-TO-RIGHT * common name: ** Phosphoserine phosphatase (L-serine...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/DADA DADA] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/PSP_L PSP_L] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Deoxyadenosine deaminase
+
** Phosphoserine phosphatase (L-serine)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[h2o]][c] '''+''' 1.0 [[dad_2]][c] '''+''' 1.0 [[h]][c] '''=>''' 1.0 [[din]][c] '''+''' 1.0 [[nh4]][c]
+
** 1.0 [[h2o]][c] '''+''' 1.0 [[pser__L]][c] '''=>''' 1.0 [[ser__L]][c] '''+''' 1.0 [[pi]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 H2O H2O[c] '''+''' 1.0 Deoxyadenosine[c] '''+''' 1.0 H+[c] '''=>''' 1.0 Deoxyinosine[c] '''+''' 1.0 Ammonium[c]
+
** 1.0 H2O H2O[c] '''+''' 1.0 O-Phospho-L-serine[c] '''=>''' 1.0 L-Serine[c] '''+''' 1.0 Phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[B471_RS21790]]
 
−
** [[pantograph]]-[[cljungdahlii]]
 
−
** [[pantograph]]-[[aferrooxidans]]
 
 
== Pathways  ==
 
== Pathways  ==
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
−
** '''472''' reactions found over '''2349''' reactions in the full pathway
+
** '''471''' reactions found over '''2349''' reactions in the full pathway
−
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
+
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
−
** '''64''' reactions found over '''298''' reactions in the full pathway
+
** '''101''' reactions found over '''715''' reactions in the full pathway
 +
* [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200]
 +
** '''51''' reactions found over '''220''' reactions in the full pathway
 +
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
 +
** '''78''' reactions found over '''228''' reactions in the full pathway
 +
* [[map00680]]: [http://www.genome.jp/dbget-bin/www_bget?map00680 map00680]
 +
** '''14''' reactions found over '''75''' reactions in the full pathway
 +
* [[map00260]]: [http://www.genome.jp/dbget-bin/www_bget?map00260 map00260]
 +
** '''24''' reactions found over '''133''' reactions in the full pathway
 +
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 +
** '''148''' reactions found over '''694''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[manual]]
−
** [[pantograph]]:
+
** Source: [[manual-reaction_to_add_delete]]
−
*** [[aferrooxidans]]
+
*** Comment: [[reaction added from literature evidence or biological expertise]]
−
*** [[cljungdahlii]]
+
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28190 28190]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21208 21208]
−
* BioCyc : META:ADDALT-RXN
+
* BioCyc : META:RXN0-5114
−
* MetaNetX (MNX) Equation : MNXR97076
+
* MetaNetX (MNX) Equation : MNXR103260
−
* KEGG Reaction : R02556
+
* KEGG Reaction : R00582
−
* EC Number : 3.5.4.4
+
* EC Number : 3.1.3.3
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Deoxyadenosine deaminase}}
+
{{#set: common name=Phosphoserine phosphatase (L-serine)}}
−
{{#set: gene associated=B471_RS21790}}
+
{{#set: in pathway=map01100|map01120|map01200|map01230|map00680|map00260|map01130}}
−
{{#set: in pathway=map01100|map00230}}
+
{{#set: reconstruction category=manual}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction source=manual-reaction_to_add_delete}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction comment=reaction added from literature evidence or biological expertise}}
−
{{#set: reconstruction source=aferrooxidans|cljungdahlii}}
+

Revision as of 23:35, 20 March 2018

Reaction PSP_L

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Phosphoserine phosphatase (L-serine)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 H2O H2O[c] + 1.0 O-Phospho-L-serine[c] => 1.0 L-Serine[c] + 1.0 Phosphate[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:RXN0-5114
  • MetaNetX (MNX) Equation : MNXR103260
  • KEGG Reaction : R00582
  • EC Number : 3.1.3.3




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