Difference between revisions of "3hhcoa"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/SHCHD2 SHCHD2] == * direction: ** LEFT-TO-RIGHT * common name: ** Sirohydrochlorin dehydrogenase (N...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/UPPRT UPPRT] == * direction: ** LEFT-TO-RIGHT * common name: ** Uracil phosphoribosyltransferase *...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/SHCHD2 SHCHD2] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/UPPRT UPPRT] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Sirohydrochlorin dehydrogenase (NAD)
+
** Uracil phosphoribosyltransferase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[dscl]][c] '''+''' 1.0 [[nad]][c] '''=>''' 1.0 [[scl]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[nadh]][c]
+
** 1.0 [[ura]][c] '''+''' 1.0 [[prpp]][c] '''=>''' 1.0 [[ump]][c] '''+''' 1.0 [[ppi]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 Dihydrosirohydrochlorin[c] '''+''' 1.0 Nicotinamide adenine dinucleotide[c] '''=>''' 1.0 Sirohydrochlorin[c] '''+''' 1.0 H+[c] '''+''' 1.0 Nicotinamide adenine dinucleotide - reduced[c]
+
** 1.0 Uracil[c] '''+''' 1.0 5-Phospho-alpha-D-ribose 1-diphosphate[c] '''=>''' 1.0 UMP C9H11N2O9P[c] '''+''' 1.0 Diphosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[B471_RS0109085]]
 +
** [[pantograph]]-[[cljungdahlii]]
 +
** [[pantograph]]-[[aferrooxidans]]
 +
* [[B471_RS0116945]]
 +
** [[pantograph]]-[[cljungdahlii]]
 +
** [[pantograph]]-[[bsubtilis]]
 
== Pathways  ==
 
== Pathways  ==
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
−
** '''472''' reactions found over '''2349''' reactions in the full pathway
+
** '''471''' reactions found over '''2349''' reactions in the full pathway
−
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
+
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
−
** '''212''' reactions found over '''1054''' reactions in the full pathway
+
** '''68''' reactions found over '''244''' reactions in the full pathway
−
* [[map00860]]: [http://www.genome.jp/dbget-bin/www_bget?map00860 map00860]
+
−
** '''23''' reactions found over '''106''' reactions in the full pathway
+
−
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
+
−
** '''101''' reactions found over '''715''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[manual]]:
+
* Category: [[orthology]]
−
** [[reaction added from literature evidence or biological expertise]]
+
** Source: [[orthology-cljungdahlii]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-bsubtilis]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-aferrooxidans]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15613 15613]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13017 13017]
−
* BioCyc : META:DIMETHUROPORDEHYDROG-RXN
+
* EC Number : 2.4.2.9
−
* MetaNetX (MNX) Equation : MNXR104373
+
* MetaNetX (MNX) Equation : MNXR105142
−
* KEGG Reaction : R03947
+
* KEGG Reaction : R00966
−
* EC Number : 1.3.1.76
+
* BioCyc : META:URACIL-PRIBOSYLTRANS-RXN
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Sirohydrochlorin dehydrogenase (NAD)}}
+
{{#set: common name=Uracil phosphoribosyltransferase}}
−
{{#set: in pathway=map01100|map01110|map00860|map01120}}
+
{{#set: gene associated=B471_RS0109085|B471_RS0116945}}
−
{{#set: reconstruction category=manual}}
+
{{#set: in pathway=map01100|map00240}}
−
{{#set: reconstruction source=reaction added from literature evidence or biological expertise}}
+
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-cljungdahlii|orthology-bsubtilis|orthology-aferrooxidans}}
 +
{{#set: reconstruction tool=pantograph}}

Revision as of 23:35, 20 March 2018

Reaction UPPRT

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Uracil phosphoribosyltransferase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Uracil[c] + 1.0 5-Phospho-alpha-D-ribose 1-diphosphate[c] => 1.0 UMP C9H11N2O9P[c] + 1.0 Diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • EC Number : 2.4.2.9
  • MetaNetX (MNX) Equation : MNXR105142
  • KEGG Reaction : R00966
  • BioCyc : META:URACIL-PRIBOSYLTRANS-RXN




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