Difference between revisions of "Slcys"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/AIRCr AIRCr] == * direction: ** REVERSIBLE * common name: ** Phosphoribosylaminoimidazole carboxyla...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/EAR120y_CUT EAR120y_CUT] == * direction: ** REVERSIBLE * Synonym(s): == Reaction Formula == * With...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/AIRCr AIRCr] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/EAR120y_CUT EAR120y_CUT] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
* common name:
 
** Phosphoribosylaminoimidazole carboxylase
 
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[air]][c] '''+''' 1.0 [[co2]][c] '''<=>''' 1.0 [[5aizc]][c] '''+''' 1.0 [[h]][c]
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** 1.0 [[nadph]][c] '''+''' 1.0 [[tddec2eACP]][c] '''+''' 1.0 [[h]][c] '''<=>''' 1.0 [[ddcaACP]][c] '''+''' 1.0 [[nadp]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 5-amino-1-(5-phospho-D-ribosyl)imidazole[c] '''+''' 1.0 CO2 CO2[c] '''<=>''' 1.0 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate[c] '''+''' 1.0 H+[c]
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** 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c] '''+''' 1.0 Trans-Dodec-2-enoyl-[acyl-carrier protein][c] '''+''' 1.0 H+[c] '''<=>''' 1.0 Dodecanoyl-ACP (n-C12:0ACP)[c] '''+''' 1.0 Nicotinamide adenine dinucleotide phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[B471_RS0118100]]
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* [[B471_RS0108775]]
** [[pantograph]]-[[aferrooxidans]]
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** missing_rxn_creator
* [[B471_RS0118105]]
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** [[pantograph]]-[[cljungdahlii]]
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** [[pantograph]]-[[aferrooxidans]]
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== Pathways  ==
 
== Pathways  ==
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
** '''472''' reactions found over '''2349''' reactions in the full pathway
 
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 
** '''212''' reactions found over '''1054''' reactions in the full pathway
 
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
 
** '''64''' reactions found over '''298''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
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* Category: [[manual]]
** [[pantograph]]:
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** Source: [[manual-missing_rxn_creator]]
*** [[aferrooxidans]]
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*** Comment: [[reaction found from orthology but we fixed reversibility based on biological expertise]]
*** [[cljungdahlii]]
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== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10792 10792]
 
* MetaNetX (MNX) Equation : MNXR95646
 
* EC Number : 4.1.1.21
 
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
{{#set: common name=Phosphoribosylaminoimidazole carboxylase}}
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{{#set: gene associated=B471_RS0108775}}
{{#set: gene associated=B471_RS0118100|B471_RS0118105}}
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{{#set: in pathway=}}
{{#set: in pathway=map01100|map01110|map00230}}
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{{#set: reconstruction category=manual}}
{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=manual-missing_rxn_creator}}
{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction comment=reaction found from orthology but we fixed reversibility based on biological expertise}}
{{#set: reconstruction source=aferrooxidans|cljungdahlii}}
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Revision as of 23:36, 20 March 2018

Reaction EAR120y_CUT

  • direction:
    • REVERSIBLE
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c] + 1.0 Trans-Dodec-2-enoyl-[acyl-carrier protein][c] + 1.0 H+[c] <=> 1.0 Dodecanoyl-ACP (n-C12:0ACP)[c] + 1.0 Nicotinamide adenine dinucleotide phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links