Difference between revisions of "Udcpdp"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GARFT GARFT] == * direction: ** REVERSIBLE * common name: ** Phosphoribosylglycinamide formyltransf...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/PUNP8 PUNP8] == * direction: ** REVERSIBLE * common name: ** Purine nucleoside phosphorylase nebul...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/GARFT GARFT] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/PUNP8 PUNP8] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
 
* common name:
 
* common name:
−
** Phosphoribosylglycinamide formyltransferase
+
** Purine nucleoside phosphorylase  nebularine
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[10fthf]][c] '''+''' 1.0 [[gar]][c] '''<=>''' 1.0 [[h]][c] '''+''' 1.0 [[thf]][c] '''+''' 1.0 [[fgam]][c]
+
** 1.0 [[pi]][c] '''+''' 1.0 [[nebari]][c] '''+''' 1.0 [[h]][c] '''<=>''' 1.0 [[r1p]][c] '''+''' 1.0 [[purine]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 10-Formyltetrahydrofolate[c] '''+''' 1.0 N1-(5-Phospho-D-ribosyl)glycinamide[c] '''<=>''' 1.0 H+[c] '''+''' 1.0 5,6,7,8-Tetrahydrofolate[c] '''+''' 1.0 N2-Formyl-N1-(5-phospho-D-ribosyl)glycinamide[c]
+
** 1.0 Phosphate[c] '''+''' 1.0 Nebularine C10H12N4O4[c] '''+''' 1.0 H+[c] '''<=>''' 1.0 Alpha-D-Ribose 1-phosphate[c] '''+''' 1.0 Purine C5H5N4[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[B471_RS0101625]]
+
* [[B471_RS0100890]]
−
** [[pantograph]]-[[aferrooxidans]]
+
−
* [[B471_RS0105250]]
+
−
** [[pantograph]]-[[cljungdahlii]]
+
 
** [[pantograph]]-[[bsubtilis]]
 
** [[pantograph]]-[[bsubtilis]]
−
** [[pantograph]]-[[aferrooxidans]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
−
** '''472''' reactions found over '''2349''' reactions in the full pathway
 
−
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 
−
** '''148''' reactions found over '''694''' reactions in the full pathway
 
−
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 
−
** '''212''' reactions found over '''1054''' reactions in the full pathway
 
−
* [[map00670]]: [http://www.genome.jp/dbget-bin/www_bget?map00670 map00670]
 
−
** '''13''' reactions found over '''65''' reactions in the full pathway
 
−
* [[map00230]]: [http://www.genome.jp/dbget-bin/www_bget?map00230 map00230]
 
−
** '''64''' reactions found over '''298''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-bsubtilis]]
−
*** [[aferrooxidans]]
+
*** Tool: [[pantograph]]
−
*** [[cljungdahlii]]
+
−
*** [[bsubtilis]]
+
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15053 15053]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19805 19805]
−
* MetaNetX (MNX) Equation : MNXR99623
+
* MetaNetX (MNX) Equation : MNXR103350
−
* KEGG Reaction : R04325
+
* KEGG Reaction : R08368
−
* EC Number : 2.1.2.2
+
* EC Number : 2.4.2.1
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=Phosphoribosylglycinamide formyltransferase}}
+
{{#set: common name=Purine nucleoside phosphorylase  nebularine }}
−
{{#set: gene associated=B471_RS0101625|B471_RS0105250}}
+
{{#set: gene associated=B471_RS0100890}}
−
{{#set: in pathway=map01100|map01130|map01110|map00670|map00230}}
+
{{#set: in pathway=}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-bsubtilis}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=aferrooxidans|cljungdahlii|bsubtilis}}
 

Revision as of 23:36, 20 March 2018

Reaction PUNP8

  • direction:
    • REVERSIBLE
  • common name:
    • Purine nucleoside phosphorylase nebularine
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Phosphate[c] + 1.0 Nebularine C10H12N4O4[c] + 1.0 H+[c] <=> 1.0 Alpha-D-Ribose 1-phosphate[c] + 1.0 Purine C5H5N4[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • MetaNetX (MNX) Equation : MNXR103350
  • KEGG Reaction : R08368
  • EC Number : 2.4.2.1




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