Difference between revisions of "2mahmp"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/AGPR AGPR] == * direction: ** REVERSIBLE * common name: ** N-acetyl-g-glutamyl-phosphate reductase...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/CYTD CYTD] == * direction: ** LEFT-TO-RIGHT * common name: ** Cytidine deaminase * Synonym(s): ==...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/AGPR AGPR] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/CYTD CYTD] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** N-acetyl-g-glutamyl-phosphate reductase
+
** Cytidine deaminase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[acg5sa]][c] '''+''' 1.0 [[nadp]][c] '''+''' 1.0 [[pi]][c] '''<=>''' 1.0 [[nadph]][c] '''+''' 1.0 [[acg5p]][c] '''+''' 1.0 [[h]][c]
+
** 1.0 [[h]][c] '''+''' 1.0 [[h2o]][c] '''+''' 1.0 [[cytd]][c] '''=>''' 1.0 [[nh4]][c] '''+''' 1.0 [[uri]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 N-Acetyl-L-glutamate 5-semialdehyde[c] '''+''' 1.0 Nicotinamide adenine dinucleotide phosphate[c] '''+''' 1.0 Phosphate[c] '''<=>''' 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c] '''+''' 1.0 N-Acetyl-L-glutamyl 5-phosphate[c] '''+''' 1.0 H+[c]
+
** 1.0 H+[c] '''+''' 1.0 H2O H2O[c] '''+''' 1.0 Cytidine[c] '''=>''' 1.0 Ammonium[c] '''+''' 1.0 Uridine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[B471_RS0117545]]
+
* [[B471_RS0118750]]
 
** [[pantograph]]-[[cljungdahlii]]
 
** [[pantograph]]-[[cljungdahlii]]
 
** [[pantograph]]-[[bsubtilis]]
 
** [[pantograph]]-[[bsubtilis]]
−
** [[pantograph]]-[[aferrooxidans]]
 
 
== Pathways  ==
 
== Pathways  ==
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
−
** '''472''' reactions found over '''2349''' reactions in the full pathway
+
** '''471''' reactions found over '''2349''' reactions in the full pathway
−
* [[map00220]]: [http://www.genome.jp/dbget-bin/www_bget?map00220 map00220]
+
* [[map00240]]: [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
−
** '''13''' reactions found over '''65''' reactions in the full pathway
+
** '''68''' reactions found over '''244''' reactions in the full pathway
−
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
+
* [[map00983]]: [http://www.genome.jp/dbget-bin/www_bget?map00983 map00983]
−
** '''212''' reactions found over '''1054''' reactions in the full pathway
+
** '''22''' reactions found over '''72''' reactions in the full pathway
−
* [[map01210]]: [http://www.genome.jp/dbget-bin/www_bget?map01210 map01210]
+
−
** '''26''' reactions found over '''80''' reactions in the full pathway
+
−
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
+
−
** '''78''' reactions found over '''228''' reactions in the full pathway
+
−
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
+
−
** '''148''' reactions found over '''694''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-cljungdahlii]]
−
*** [[aferrooxidans]]
+
*** Tool: [[pantograph]]
−
*** [[cljungdahlii]]
+
** Source: [[orthology-bsubtilis]]
−
*** [[bsubtilis]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21588 21588]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16069 16069]
−
* BioCyc : META:N-ACETYLGLUTPREDUCT-RXN
+
* EC Number : 3.5.4.5
−
* MetaNetX (MNX) Equation : MNXR95530
+
* MetaNetX (MNX) Equation : MNXR97039
−
* KEGG Reaction : R03443
+
* KEGG Reaction : R01878
−
* EC Number : 1.2.1.38
+
* BioCyc : META:CYTIDEAM2-RXN
−
{{#set: direction=REVERSIBLE}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=N-acetyl-g-glutamyl-phosphate reductase}}
+
{{#set: common name=Cytidine deaminase}}
−
{{#set: gene associated=B471_RS0117545}}
+
{{#set: gene associated=B471_RS0118750}}
−
{{#set: in pathway=map01100|map00220|map01110|map01210|map01230|map01130}}
+
{{#set: in pathway=map01100|map00240|map00983}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-cljungdahlii|orthology-bsubtilis}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=aferrooxidans|cljungdahlii|bsubtilis}}
 

Revision as of 23:37, 20 March 2018

Reaction CYTD

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Cytidine deaminase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 H+[c] + 1.0 H2O H2O[c] + 1.0 Cytidine[c] => 1.0 Ammonium[c] + 1.0 Uridine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • EC Number : 3.5.4.5
  • MetaNetX (MNX) Equation : MNXR97039
  • KEGG Reaction : R01878
  • BioCyc : META:CYTIDEAM2-RXN




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