Difference between revisions of "For"

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(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/skm5p skm5p] == * common name: ** Shikimate 5-phosphate * Synonym(s): == Reaction(s) known t...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/IPPMIa IPPMIa] == * direction: ** REVERSIBLE * common name: ** 3-isopropylmalate dehydratase * Syno...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://bigg.ucsd.edu/universal/metabolites/skm5p skm5p] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/IPPMIa IPPMIa] ==
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* direction:
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** REVERSIBLE
 
* common name:
 
* common name:
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** Shikimate 5-phosphate
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** 3-isopropylmalate dehydratase
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[SHKK]]
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** 1.0 [[3c2hmp]][c] '''<=>''' 1.0 [[h2o]][c] '''+''' 1.0 [[2ippm]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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* [[PSCVT]]
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** 1.0 3-Carboxy-2-hydroxy-4-methylpentanoate[c] '''<=>''' 1.0 H2O H2O[c] '''+''' 1.0 2-Isopropylmaleate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[B471_RS0105525]]
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** [[pantograph]]-[[cljungdahlii]]
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** [[pantograph]]-[[bsubtilis]]
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* [[B471_RS0105965]]
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** [[pantograph]]-[[cljungdahlii]]
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* [[B471_RS0105520]]
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** [[pantograph]]-[[cljungdahlii]]
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** [[pantograph]]-[[bsubtilis]]
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== Pathways  ==
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
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** '''471''' reactions found over '''2349''' reactions in the full pathway
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* [[map01210]]: [http://www.genome.jp/dbget-bin/www_bget?map01210 map01210]
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** '''26''' reactions found over '''80''' reactions in the full pathway
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* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
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** '''212''' reactions found over '''1054''' reactions in the full pathway
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* [[map00290]]: [http://www.genome.jp/dbget-bin/www_bget?map00290 map00290]
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** '''15''' reactions found over '''49''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-cljungdahlii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-bsubtilis]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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{{#set: common name=Shikimate 5-phosphate}}
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* RHEA:
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{{#set: produced by=SHKK}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10676 10676]
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{{#set: consumed or produced by=PSCVT}}
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* EC Number : 4.2.1.33
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* MetaNetX (MNX) Equation : MNXR100827
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* KEGG Reaction : R04001
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* BioCyc : META:RXN-8991
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=3-isopropylmalate dehydratase}}
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{{#set: gene associated=B471_RS0105525|B471_RS0105965|B471_RS0105520}}
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{{#set: in pathway=map01100|map01210|map01110|map00290}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-cljungdahlii|orthology-bsubtilis}}
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{{#set: reconstruction tool=pantograph}}

Revision as of 23:37, 20 March 2018

Reaction IPPMIa

  • direction:
    • REVERSIBLE
  • common name:
    • 3-isopropylmalate dehydratase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 3-Carboxy-2-hydroxy-4-methylpentanoate[c] <=> 1.0 H2O H2O[c] + 1.0 2-Isopropylmaleate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • EC Number : 4.2.1.33
  • MetaNetX (MNX) Equation : MNXR100827
  • KEGG Reaction : R04001
  • BioCyc : META:RXN-8991




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