Difference between revisions of "Amacald"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/3OAS141 3OAS141] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxoacyl-[acyl-carrier-protein...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/TMK TMK] == * direction: ** LEFT-TO-RIGHT * common name: ** Thiamine kinase * Synonym(s): == React...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/3OAS141 3OAS141] ==
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== Reaction [http://bigg.ucsd.edu/universal/reactions/TMK TMK] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** 3-oxoacyl-[acyl-carrier-protein] synthase (n-C14:1)
+
** Thiamine kinase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1.0 [[cddec5eACP]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[malACP]][c] '''=>''' 1.0 [[ACP]][c] '''+''' 1.0 [[co2]][c] '''+''' 1.0 [[3ocmrs7eACP]][c]
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** 1.0 [[atp]][c] '''+''' 1.0 [[thm]][c] '''=>''' 1.0 [[adp]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[thmmp]][c]
 
* With common name(s):
 
* With common name(s):
** 1.0 Cis-dodec-5-enoyl-[acyl-carrier protein] (n-C12:1)[c] '''+''' 1.0 H+[c] '''+''' 1.0 Malonyl-[acyl-carrier protein][c] '''=>''' 1.0 Acyl carrier protein[c] '''+''' 1.0 CO2 CO2[c] '''+''' 1.0 3-oxo-cis-myristol-7-eoyl-[acyl-carrier protein][c]
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** 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 Thiamin[c] '''=>''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 H+[c] '''+''' 1.0 Thiamin monophosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Genes have been associated with this reaction based on different elements listed below.
 
* [[B471_RS0109650]]
 
** [[pantograph]]-[[cljungdahlii]]
 
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map00730]]: [http://www.genome.jp/dbget-bin/www_bget?map00730 map00730]
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** '''8''' reactions found over '''24''' reactions in the full pathway
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
** '''472''' reactions found over '''2349''' reactions in the full pathway
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** '''471''' reactions found over '''2349''' reactions in the full pathway
* [[map00780]]: [http://www.genome.jp/dbget-bin/www_bget?map00780 map00780]
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** '''28''' reactions found over '''67''' reactions in the full pathway
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* [[map00061]]: [http://www.genome.jp/dbget-bin/www_bget?map00061 map00061]
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** '''54''' reactions found over '''160''' reactions in the full pathway
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== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
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* Category: [[manual]]
** [[pantograph]]:
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** Source: [[manual-reaction_to_add_delete]]
*** [[cljungdahlii]]
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*** Comment: [[reaction added from literature evidence or biological expertise]]
 
== External links  ==
 
== External links  ==
* MetaNetX (MNX) Equation : MNXR94958
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* RHEA:
* EC Number : 2.3.1.41
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12012 12012]
 +
* BioCyc : META:THIKIN-RXN
 +
* MetaNetX (MNX) Equation : MNXR104898
 +
* KEGG Reaction : R02134
 +
* EC Number : 2.7.1.89
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=3-oxoacyl-[acyl-carrier-protein] synthase (n-C14:1)}}
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{{#set: common name=Thiamine kinase}}
{{#set: gene associated=B471_RS0109650}}
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{{#set: in pathway=map00730|map01100}}
{{#set: in pathway=map01100|map00780|map00061}}
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{{#set: reconstruction category=manual}}
{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=manual-reaction_to_add_delete}}
{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction comment=reaction added from literature evidence or biological expertise}}
{{#set: reconstruction source=cljungdahlii}}
+

Revision as of 23:39, 20 March 2018

Reaction TMK

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Thiamine kinase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 ATP C10H12N5O13P3[c] + 1.0 Thiamin[c] => 1.0 ADP C10H12N5O10P2[c] + 1.0 H+[c] + 1.0 Thiamin monophosphate[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links

  • RHEA:
  • BioCyc : META:THIKIN-RXN
  • MetaNetX (MNX) Equation : MNXR104898
  • KEGG Reaction : R02134
  • EC Number : 2.7.1.89