Difference between revisions of "Ddcap"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/3HAD140 3HAD140] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-hydroxyacyl-[acyl-carrier-pro...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GLYCK GLYCK] == * direction: ** LEFT-TO-RIGHT * common name: ** Glycerate kinase * Synonym(s): ==...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/3HAD140 3HAD140] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/GLYCK GLYCK] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** 3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C14:0)
+
** Glycerate kinase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[3hmrsACP]][c] '''=>''' 1.0 [[tmrs2eACP]][c] '''+''' 1.0 [[h2o]][c]
+
** 1.0 [[glyc__R]][c] '''+''' 1.0 [[atp]][c] '''=>''' 1.0 [[h]][c] '''+''' 1.0 [[3pg]][c] '''+''' 1.0 [[adp]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 (R)-3-Hydroxytetradecanoyl-[acyl-carrier protein][c] '''=>''' 1.0 Trans-Tetradec-2-enoyl-[acyl-carrier protein][c] '''+''' 1.0 H2O H2O[c]
+
** 1.0 (R)-Glycerate[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''=>''' 1.0 H+[c] '''+''' 1.0 3-Phospho-D-glycerate[c] '''+''' 1.0 ADP C10H12N5O10P2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[B471_RS21900]]
 +
** [[pantograph]]-[[cljungdahlii]]
 +
** [[pantograph]]-[[bsubtilis]]
 
== Pathways  ==
 
== Pathways  ==
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
−
** '''472''' reactions found over '''2349''' reactions in the full pathway
+
** '''471''' reactions found over '''2349''' reactions in the full pathway
−
* [[map00780]]: [http://www.genome.jp/dbget-bin/www_bget?map00780 map00780]
+
* [[map00630]]: [http://www.genome.jp/dbget-bin/www_bget?map00630 map00630]
−
** '''28''' reactions found over '''67''' reactions in the full pathway
+
** '''23''' reactions found over '''129''' reactions in the full pathway
−
* [[map01212]]: [http://www.genome.jp/dbget-bin/www_bget?map01212 map01212]
+
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
−
** '''43''' reactions found over '''182''' reactions in the full pathway
+
** '''212''' reactions found over '''1054''' reactions in the full pathway
−
* [[map00061]]: [http://www.genome.jp/dbget-bin/www_bget?map00061 map00061]
+
* [[map00561]]: [http://www.genome.jp/dbget-bin/www_bget?map00561 map00561]
−
** '''54''' reactions found over '''160''' reactions in the full pathway
+
** '''9''' reactions found over '''83''' reactions in the full pathway
 +
* [[map01200]]: [http://www.genome.jp/dbget-bin/www_bget?map01200 map01200]
 +
** '''51''' reactions found over '''220''' reactions in the full pathway
 +
* [[map00260]]: [http://www.genome.jp/dbget-bin/www_bget?map00260 map00260]
 +
** '''24''' reactions found over '''133''' reactions in the full pathway
 +
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 +
** '''148''' reactions found over '''694''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[manual]]:
+
* Category: [[orthology]]
−
** [[reaction added from literature evidence or biological expertise]]
+
** Source: [[orthology-cljungdahlii]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-bsubtilis]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* BioCyc : META:RXN-9537
+
* EC Number : 2.7.1.31
−
* MetaNetX (MNX) Equation : MNXR94879
+
* BioCyc : META:GLY3KIN-RXN
−
* KEGG Reaction : R04568
+
* MetaNetX (MNX) Equation : MNXR100328
−
* EC Number : 2.3.1.-
+
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23516 23516]
 +
* Reactome : REACT_R-BTA-6799495
 +
* KEGG Reaction : R01514
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C14:0)}}
+
{{#set: common name=Glycerate kinase}}
−
{{#set: in pathway=map01100|map00780|map01212|map00061}}
+
{{#set: gene associated=B471_RS21900}}
−
{{#set: reconstruction category=manual}}
+
{{#set: in pathway=map01100|map00630|map01110|map00561|map01200|map00260|map01130}}
−
{{#set: reconstruction source=reaction added from literature evidence or biological expertise}}
+
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-cljungdahlii|orthology-bsubtilis}}
 +
{{#set: reconstruction tool=pantograph}}

Revision as of 23:39, 20 March 2018

Reaction GLYCK

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Glycerate kinase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 (R)-Glycerate[c] + 1.0 ATP C10H12N5O13P3[c] => 1.0 H+[c] + 1.0 3-Phospho-D-glycerate[c] + 1.0 ADP C10H12N5O10P2[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • EC Number : 2.7.1.31
  • BioCyc : META:GLY3KIN-RXN
  • MetaNetX (MNX) Equation : MNXR100328
  • RHEA:
  • Reactome : REACT_R-BTA-6799495
  • KEGG Reaction : R01514




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