Difference between revisions of "Ametam"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/NADK5 NADK5] == * direction: ** LEFT-TO-RIGHT * common name: ** NAD kinase dTTP * Synonym(s): ==...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/CHORM CHORM] == * direction: ** LEFT-TO-RIGHT * common name: ** Chorismate mutase * Synonym(s): ==...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/NADK5 NADK5] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/CHORM CHORM] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** NAD kinase  dTTP
+
** Chorismate mutase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[dttp]][c] '''+''' 1.0 [[nad]][c] '''=>''' 1.0 [[nadp]][c] '''+''' 1.0 [[dtdp]][c] '''+''' 1.0 [[h]][c]
+
** 1.0 [[chor]][c] '''=>''' 1.0 [[pphn]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 DTTP C10H13N2O14P3[c] '''+''' 1.0 Nicotinamide adenine dinucleotide[c] '''=>''' 1.0 Nicotinamide adenine dinucleotide phosphate[c] '''+''' 1.0 DTDP C10H13N2O11P2[c] '''+''' 1.0 H+[c]
+
** 1.0 Chorismate[c] '''=>''' 1.0 Prephenate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[B471_RS0101810]]
+
* [[B471_RS0109435]]
 +
** [[pantograph]]-[[cljungdahlii]]
 
** [[pantograph]]-[[bsubtilis]]
 
** [[pantograph]]-[[bsubtilis]]
 +
* [[B471_RS0101030]]
 +
** [[pantograph]]-[[bsubtilis]]
 +
* [[B471_RS0108560]]
 +
** [[pantograph]]-[[cljungdahlii]]
 +
** [[pantograph]]-[[aferrooxidans]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 +
** '''471''' reactions found over '''2349''' reactions in the full pathway
 +
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 +
** '''148''' reactions found over '''694''' reactions in the full pathway
 +
* [[map00400]]: [http://www.genome.jp/dbget-bin/www_bget?map00400 map00400]
 +
** '''17''' reactions found over '''59''' reactions in the full pathway
 +
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
 +
** '''212''' reactions found over '''1054''' reactions in the full pathway
 +
* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
 +
** '''78''' reactions found over '''228''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-cljungdahlii]]
−
*** [[bsubtilis]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-bsubtilis]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-aferrooxidans]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* MetaNetX (MNX) Equation : MNXR101887
+
* RHEA:
−
* EC Number : 2.7.1.23
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13897 13897]
 +
* EC Number : 5.4.99.5
 +
* MetaNetX (MNX) Equation : MNXR96708
 +
* KEGG Reaction : R01715
 +
* BioCyc : META:CHORISMATEMUT-RXN
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=NAD kinase  dTTP }}
+
{{#set: common name=Chorismate mutase}}
−
{{#set: gene associated=B471_RS0101810}}
+
{{#set: gene associated=B471_RS0109435|B471_RS0101030|B471_RS0108560}}
−
{{#set: in pathway=}}
+
{{#set: in pathway=map01100|map01130|map00400|map01110|map01230}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-cljungdahlii|orthology-bsubtilis|orthology-aferrooxidans}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=bsubtilis}}
 

Revision as of 23:41, 20 March 2018

Reaction CHORM

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Chorismate mutase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Chorismate[c] => 1.0 Prephenate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • RHEA:
  • EC Number : 5.4.99.5
  • MetaNetX (MNX) Equation : MNXR96708
  • KEGG Reaction : R01715
  • BioCyc : META:CHORISMATEMUT-RXN




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