Difference between revisions of "Dtdprmn"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/XYLK XYLK] == * direction: ** LEFT-TO-RIGHT * common name: ** Xylulokinase * Synonym(s): == Reacti...")
 
(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/RPI RPI] == * direction: ** REVERSIBLE * common name: ** Ribose-5-phosphate isomerase * Synonym(s):...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://bigg.ucsd.edu/universal/reactions/XYLK XYLK] ==
+
== Reaction [http://bigg.ucsd.edu/universal/reactions/RPI RPI] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** Xylulokinase
+
** Ribose-5-phosphate isomerase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1.0 [[xylu__D]][c] '''+''' 1.0 [[atp]][c] '''=>''' 1.0 [[adp]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[xu5p__D]][c]
+
** 1.0 [[r5p]][c] '''<=>''' 1.0 [[ru5p__D]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1.0 D-Xylulose[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''=>''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 H+[c] '''+''' 1.0 D-Xylulose 5-phosphate[c]
+
** 1.0 Alpha-D-Ribose 5-phosphate[c] '''<=>''' 1.0 D-Ribulose 5-phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[B471_RS0113565]]
+
* [[B471_RS0116940]]
 
** [[pantograph]]-[[cljungdahlii]]
 
** [[pantograph]]-[[cljungdahlii]]
−
* [[B471_RS0101525]]
 
 
** [[pantograph]]-[[bsubtilis]]
 
** [[pantograph]]-[[bsubtilis]]
 +
* [[B471_RS0116500]]
 +
** [[pantograph]]-[[aferrooxidans]]
 
== Pathways  ==
 
== Pathways  ==
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
 
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
−
** '''472''' reactions found over '''2349''' reactions in the full pathway
+
** '''471''' reactions found over '''2349''' reactions in the full pathway
−
* [[map00040]]: [http://www.genome.jp/dbget-bin/www_bget?map00040 map00040]
+
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
−
** '''6''' reactions found over '''54''' reactions in the full pathway
+
** '''212''' reactions found over '''1054''' reactions in the full pathway
 +
* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
 +
** '''101''' reactions found over '''715''' reactions in the full pathway
 +
* [[map00051]]: [http://www.genome.jp/dbget-bin/www_bget?map00051 map00051]
 +
** '''11''' reactions found over '''63''' reactions in the full pathway
 +
* [[map00710]]: [http://www.genome.jp/dbget-bin/www_bget?map00710 map00710]
 +
** '''18''' reactions found over '''71''' reactions in the full pathway
 +
* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
 +
** '''148''' reactions found over '''694''' reactions in the full pathway
 +
* [[map00030]]: [http://www.genome.jp/dbget-bin/www_bget?map00030 map00030]
 +
** '''20''' reactions found over '''69''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-cljungdahlii]]
−
*** [[cljungdahlii]]
+
*** Tool: [[pantograph]]
−
*** [[bsubtilis]]
+
** Source: [[orthology-bsubtilis]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-aferrooxidans]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* EC Number : 2.7.1.17
+
* MetaNetX (MNX) Equation : MNXR104084
−
* BioCyc : META:XYLULOKIN-RXN
+
* EC Number : 5.3.1.6
−
* MetaNetX (MNX) Equation : MNXR105255
+
{{#set: direction=REVERSIBLE}}
−
* RHEA:
+
{{#set: common name=Ribose-5-phosphate isomerase}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10964 10964]
+
{{#set: gene associated=B471_RS0116940|B471_RS0116500}}
−
* Reactome : REACT_R-ATH-5662466
+
{{#set: in pathway=map01100|map01110|map01120|map00051|map00710|map01130|map00030}}
−
* KEGG Reaction : R01639
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=Xylulokinase}}
+
−
{{#set: gene associated=B471_RS0113565|B471_RS0101525}}
+
−
{{#set: in pathway=map01100|map00040}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-cljungdahlii|orthology-bsubtilis|orthology-aferrooxidans}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=cljungdahlii|bsubtilis}}
 

Revision as of 00:41, 21 March 2018

Reaction RPI

  • direction:
    • REVERSIBLE
  • common name:
    • Ribose-5-phosphate isomerase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 Alpha-D-Ribose 5-phosphate[c] <=> 1.0 D-Ribulose 5-phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

  • MetaNetX (MNX) Equation : MNXR104084
  • EC Number : 5.3.1.6




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