Difference between revisions of "PSD180"

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(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/gly gly] == * common name: ** Glycine * Synonym(s): == Reaction(s) known to consume the comp...")
 
(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00550 map00550] == * common_name: ** Peptidoglycan biosynthesis * Synonym(s): == Reaction(s) found...")
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[[Category:Metabolite]]
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[[Category:Pathway]]
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== Metabolite [http://bigg.ucsd.edu/universal/metabolites/gly gly] ==
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== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00550 map00550] ==
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* common name:
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* common_name:
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** Glycine
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** Peptidoglycan biosynthesis
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) known to consume the compound ==
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== Reaction(s) found ==
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* [[BIOMASS]]
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'''14''' reactions found over '''27''' reactions in the full pathway
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* [[GLYO]]
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* [[ALAALAr]]
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* [[PRAGSr_CUT]]
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** 1 associated gene(s):
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* [[GLYCL]]
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*** [[B471_RS0112130]]
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* [[EX_gly]]
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** 3 reconstruction source(s) associated:
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* [[GLYt2r_CUT]]
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*** [[orthology-cljungdahlii]]
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* [[GLYO1]]
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*** [[orthology-bsubtilis]]
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== Reaction(s) known to produce the compound ==
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*** [[orthology-aferrooxidans]]
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* [[ALDD31_1]]
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* [[MDDCP1ex]]
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* [[GLYt2r_CUT]]
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** 1 associated gene(s):
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* [[SARCOX]]
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*** [[B471_RS0101180]]
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== Reaction(s) of unknown directionality ==
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** 1 reconstruction source(s) associated:
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* [[GHMT2r]]
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*** [[orthology-cljungdahlii]]
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* [[THRAi_CUT]]
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* [[MDDCP2ex]]
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* [[GLYAT]]
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** 1 associated gene(s):
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* [[AMPTASECG_CUT]]
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*** [[B471_RS0101180]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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* [[MDDCP3ex]]
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** 1 associated gene(s):
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*** [[B471_RS0101180]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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* [[MDDCP4ex]]
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** 1 associated gene(s):
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*** [[B471_RS0101180]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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* [[MDDCP5ex]]
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** 1 associated gene(s):
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*** [[B471_RS0101180]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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* [[PAPPT3]]
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** 1 associated gene(s):
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*** [[B471_RS0108980]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[UAAGDS]]
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** 2 associated gene(s):
 +
*** [[B471_RS0102460]]
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*** [[B471_RS0108970]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[UAGCVT]]
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** 1 associated gene(s):
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*** [[B471_RS0105355]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[UAGPT3]]
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** 2 associated gene(s):
 +
*** [[B471_RS0108585]]
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*** [[B471_RS0108990]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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* [[UAMAGS]]
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** 1 associated gene(s):
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*** [[B471_RS0109185]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
 +
*** [[orthology-aferrooxidans]]
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* [[UAMAS]]
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** 1 associated gene(s):
 +
*** [[B471_RS0105365]]
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** 3 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
*** [[orthology-bsubtilis]]
 +
*** [[orthology-aferrooxidans]]
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* [[UAPGR]]
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** 1 associated gene(s):
 +
*** [[B471_RS0108995]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
*** [[orthology-bsubtilis]]
 +
*** [[orthology-aferrooxidans]]
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* [[UGMDDS]]
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** 1 associated gene(s):
 +
*** [[B471_RS21735]]
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** 3 reconstruction source(s) associated:
 +
*** [[orthology-cljungdahlii]]
 +
*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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== Reaction(s) not found ==
 +
* [http://bigg.ucsd.edu/universal/reactions/MDDCP1pp MDDCP1pp]
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* [http://bigg.ucsd.edu/universal/reactions/MDDCP2pp MDDCP2pp]
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* [http://bigg.ucsd.edu/universal/reactions/MDDCP3pp MDDCP3pp]
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* [http://bigg.ucsd.edu/universal/reactions/MDDCP4pp MDDCP4pp]
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* [http://bigg.ucsd.edu/universal/reactions/MDDCP5pp MDDCP5pp]
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* [http://bigg.ucsd.edu/universal/reactions/PAPPT1 PAPPT1]
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* [http://bigg.ucsd.edu/universal/reactions/PAPPT2 PAPPT2]
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* [http://bigg.ucsd.edu/universal/reactions/UAAGLS1 UAAGLS1]
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* [http://bigg.ucsd.edu/universal/reactions/UAAGLS2 UAAGLS2]
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* [http://bigg.ucsd.edu/universal/reactions/UAGPT1 UAGPT1]
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* [http://bigg.ucsd.edu/universal/reactions/UAGPT2 UAGPT2]
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* [http://bigg.ucsd.edu/universal/reactions/UGLDDS1 UGLDDS1]
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* [http://bigg.ucsd.edu/universal/reactions/UGLDDS2 UGLDDS2]
 
== External links  ==
 
== External links  ==
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{{#set: common name=Glycine}}
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{{#set: common_name=Peptidoglycan biosynthesis}}
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{{#set: consumed by=BIOMASS|GLYO|PRAGSr_CUT|GLYCL|EX_gly|GLYt2r_CUT|GLYO1}}
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{{#set: reaction found=14}}
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{{#set: produced by=ALDD31_1|GLYt2r_CUT|SARCOX}}
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{{#set: total reaction=27}}
−
{{#set: consumed or produced by=GHMT2r|THRAi_CUT|GLYAT|AMPTASECG_CUT}}
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{{#set: completion rate=52.0}}

Revision as of 23:49, 20 March 2018

Pathway map00550

  • common_name:
    • Peptidoglycan biosynthesis
  • Synonym(s):

Reaction(s) found

14 reactions found over 27 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/cutigem/index.php?title=PSD180&oldid=4332"