Difference between revisions of "PYRt2"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/SDPDS SDPDS] == * direction: ** LEFT-TO-RIGHT * common name: ** Succinyl-diaminopimelate desuccinyl...")
 
(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00592 map00592] == * common_name: ** alpha-Linolenic acid metabolism * Synonym(s): == Reaction(s)...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://bigg.ucsd.edu/universal/reactions/SDPDS SDPDS] ==
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== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00592 map00592] ==
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* direction:
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* common_name:
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** LEFT-TO-RIGHT
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** alpha-Linolenic acid metabolism
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* common name:
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** Succinyl-diaminopimelate desuccinylase
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''1''' reactions found over '''33''' reactions in the full pathway
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** 1.0 [[h2o]][c] '''+''' 1.0 [[sl26da]][c] '''=>''' 1.0 [[succ]][c] '''+''' 1.0 [[26dap_LL]][c]
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* [[ECOAH9ir]]
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* With common name(s):
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** 2 associated gene(s):
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** 1.0 H2O H2O[c] '''+''' 1.0 N-Succinyl-LL-2,6-diaminoheptanedioate[c] '''=>''' 1.0 Succinate[c] '''+''' 1.0 LL-2,6-Diaminoheptanedioate[c]
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*** [[B471_RS0115580]]
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*** [[B471_RS0110785]]
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== Genes associated with this reaction  ==
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** 1 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-bsubtilis]]
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* [[B471_RS0118440]]
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== Reaction(s) not found ==
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** [[pantograph]]-[[bsubtilis]]
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* [http://bigg.ucsd.edu/universal/reactions/34DHOXPEGOX 34DHOXPEGOX]
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* [[B471_RS0119375]]
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* [http://bigg.ucsd.edu/universal/reactions/ALCD22xi ALCD22xi]
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** [[pantograph]]-[[aferrooxidans]]
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* [http://bigg.ucsd.edu/universal/reactions/ALCD22xim ALCD22xim]
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== Pathways  ==
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* [http://bigg.ucsd.edu/universal/reactions/ALCD23xi ALCD23xi]
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
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* [http://bigg.ucsd.edu/universal/reactions/ALCD23xim ALCD23xim]
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** '''472''' reactions found over '''2349''' reactions in the full pathway
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* [http://bigg.ucsd.edu/universal/reactions/C2M26DCOAHLm C2M26DCOAHLm]
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* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
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* [http://bigg.ucsd.edu/universal/reactions/C2M26DCOAHLx C2M26DCOAHLx]
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** '''101''' reactions found over '''715''' reactions in the full pathway
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* [http://bigg.ucsd.edu/universal/reactions/CHOLD CHOLD]
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* [[map00300]]: [http://www.genome.jp/dbget-bin/www_bget?map00300 map00300]
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* [http://bigg.ucsd.edu/universal/reactions/DHACOAH DHACOAH]
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** '''10''' reactions found over '''34''' reactions in the full pathway
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* [http://bigg.ucsd.edu/universal/reactions/ECH_3hivcoa ECH_3hivcoa]
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* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
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* [http://bigg.ucsd.edu/universal/reactions/ECOAH11p ECOAH11p]
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** '''78''' reactions found over '''228''' reactions in the full pathway
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* [http://bigg.ucsd.edu/universal/reactions/ECOAH12 ECOAH12]
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== Reconstruction information  ==
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* [http://bigg.ucsd.edu/universal/reactions/ECOAH12m ECOAH12m]
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* [[orthology]]:
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* [http://bigg.ucsd.edu/universal/reactions/ECOAH9m ECOAH9m]
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** [[pantograph]]:
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* [http://bigg.ucsd.edu/universal/reactions/KATp KATp]
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*** [[aferrooxidans]]
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* [http://bigg.ucsd.edu/universal/reactions/OGCOAAT OGCOAAT]
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*** [[bsubtilis]]
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* [http://bigg.ucsd.edu/universal/reactions/PLIPA1A120pp PLIPA1A120pp]
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* [http://bigg.ucsd.edu/universal/reactions/PLIPA1A140pp PLIPA1A140pp]
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* [http://bigg.ucsd.edu/universal/reactions/PLIPA1A141pp PLIPA1A141pp]
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* [http://bigg.ucsd.edu/universal/reactions/PLIPA1A160pp PLIPA1A160pp]
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* [http://bigg.ucsd.edu/universal/reactions/PLIPA1A180pp PLIPA1A180pp]
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* [http://bigg.ucsd.edu/universal/reactions/PLIPA1E160 PLIPA1E160]
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* [http://bigg.ucsd.edu/universal/reactions/PLIPA1E160pp PLIPA1E160pp]
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* [http://bigg.ucsd.edu/universal/reactions/PLIPA1E180 PLIPA1E180]
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* [http://bigg.ucsd.edu/universal/reactions/PLIPA1E180pp PLIPA1E180pp]
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* [http://bigg.ucsd.edu/universal/reactions/PLIPA2A120pp PLIPA2A120pp]
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* [http://bigg.ucsd.edu/universal/reactions/PLIPA2A140pp PLIPA2A140pp]
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* [http://bigg.ucsd.edu/universal/reactions/PLIPA2A141pp PLIPA2A141pp]
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* [http://bigg.ucsd.edu/universal/reactions/PLIPA2A160pp PLIPA2A160pp]
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* [http://bigg.ucsd.edu/universal/reactions/PLIPA2A180pp PLIPA2A180pp]
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* [http://bigg.ucsd.edu/universal/reactions/T2M26DCOAHLm T2M26DCOAHLm]
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* [http://bigg.ucsd.edu/universal/reactions/T2M26DCOAHLx T2M26DCOAHLx]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: common_name=alpha-Linolenic acid metabolism}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22608 22608]
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{{#set: reaction found=1}}
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* BioCyc : META:SUCCDIAMINOPIMDESUCC-RXN
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{{#set: total reaction=33}}
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* MetaNetX (MNX) Equation : MNXR104300
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{{#set: completion rate=3.0}}
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* KEGG Reaction : R02734
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* EC Number : 3.5.1.18
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Succinyl-diaminopimelate desuccinylase}}
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{{#set: gene associated=B471_RS0118440|B471_RS0119375}}
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{{#set: in pathway=map01100|map01120|map00300|map01230}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=aferrooxidans|bsubtilis}}
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Revision as of 00:49, 21 March 2018

Pathway map00592

  • common_name:
    • alpha-Linolenic acid metabolism
  • Synonym(s):

Reaction(s) found

1 reactions found over 33 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/cutigem/index.php?title=PYRt2&oldid=4362"