Difference between revisions of "APRAUR"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/DHFS DHFS] == * direction: ** LEFT-TO-RIGHT * common name: ** Dihydrofolate synthase * Synonym(s):...")
 
(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00290 map00290] == * common_name: ** Valine, leucine and isoleucine biosynthesis * Synonym(s): ==...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://bigg.ucsd.edu/universal/reactions/DHFS DHFS] ==
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== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00290 map00290] ==
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* direction:
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* common_name:
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** LEFT-TO-RIGHT
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** Valine, leucine and isoleucine biosynthesis
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* common name:
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** Dihydrofolate synthase
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''15''' reactions found over '''49''' reactions in the full pathway
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** 1.0 [[glu__L]][c] '''+''' 1.0 [[atp]][c] '''+''' 1.0 [[dhpt]][c] '''=>''' 1.0 [[pi]][c] '''+''' 1.0 [[adp]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[dhf]][c]
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* [[ACHBS]]
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* With common name(s):
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** 0 associated gene:
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** 1.0 L-Glutamate[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''+''' 1.0 Dihydropteroate[c] '''=>''' 1.0 Phosphate[c] '''+''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 H+[c] '''+''' 1.0 7,8-Dihydrofolate[c]
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** 1 reconstruction source(s) associated:
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*** [[manual-reaction_to_add_delete]]
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== Genes associated with this reaction  ==
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* [[ACLS]]
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Genes have been associated with this reaction based on different elements listed below.
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** 1 associated gene(s):
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* [[B471_RS0119120]]
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*** [[B471_RS0108550]]
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** [[pantograph]]-[[bsubtilis]]
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** 1 reconstruction source(s) associated:
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** [[pantograph]]-[[aferrooxidans]]
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*** [[orthology-cljungdahlii]]
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== Pathways  ==
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* [[DHAD1]]
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
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** 1 associated gene(s):
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** '''472''' reactions found over '''2349''' reactions in the full pathway
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*** [[B471_RS0117830]]
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* [[map00790]]: [http://www.genome.jp/dbget-bin/www_bget?map00790 map00790]
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** 2 reconstruction source(s) associated:
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** '''10''' reactions found over '''41''' reactions in the full pathway
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*** [[orthology-cljungdahlii]]
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== Reconstruction information  ==
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*** [[orthology-bsubtilis]]
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* [[orthology]]:
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* [[DHAD2]]
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** [[pantograph]]:
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** 1 associated gene(s):
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*** [[aferrooxidans]]
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*** [[B471_RS0117830]]
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*** [[bsubtilis]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[ILETA]]
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** 4 associated gene(s):
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*** [[B471_RS0110105]]
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*** [[B471_RS0102340]]
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*** [[B471_RS0106435]]
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*** [[B471_RS0109150]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[IPMD]]
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** 1 associated gene(s):
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*** [[B471_RS0108545]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[IPPMIa]]
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** 3 associated gene(s):
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*** [[B471_RS0105525]]
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*** [[B471_RS0105965]]
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*** [[B471_RS0105520]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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* [[IPPMIb]]
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** 3 associated gene(s):
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*** [[B471_RS0105965]]
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*** [[B471_RS0105520]]
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*** [[B471_RS0105525]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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* [[IPPS]]
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** 1 associated gene(s):
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*** [[B471_RS21670]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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* [[KARA1]]
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** 1 associated gene(s):
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*** [[B471_RS0108535]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[KARA2]]
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** 1 associated gene(s):
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*** [[B471_RS0108535]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[LEUTA]]
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** 4 associated gene(s):
 +
*** [[B471_RS0106435]]
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*** [[B471_RS0110105]]
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*** [[B471_RS0102340]]
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*** [[B471_RS0109150]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[OMCDC]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[manual-reaction_to_add_delete]]
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* [[THRD_L]]
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** 1 associated gene(s):
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*** [[B471_RS0107435]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[VALTA]]
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** 4 associated gene(s):
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*** [[B471_RS0109150]]
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*** [[B471_RS0110105]]
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*** [[B471_RS0106435]]
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*** [[B471_RS0102340]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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== Reaction(s) not found ==
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* [http://bigg.ucsd.edu/universal/reactions/ACAS_2ahbut ACAS_2ahbut]
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* [http://bigg.ucsd.edu/universal/reactions/ACHBSm ACHBSm]
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* [http://bigg.ucsd.edu/universal/reactions/ACLSm ACLSm]
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* [http://bigg.ucsd.edu/universal/reactions/APLh APLh]
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* [http://bigg.ucsd.edu/universal/reactions/APLm APLm]
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* [http://bigg.ucsd.edu/universal/reactions/BCTA_glu_h BCTA_glu_h]
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* [http://bigg.ucsd.edu/universal/reactions/BCTA_val_h BCTA_val_h]
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* [http://bigg.ucsd.edu/universal/reactions/BCTAh BCTAh]
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* [http://bigg.ucsd.edu/universal/reactions/CITCIb CITCIb]
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* [http://bigg.ucsd.edu/universal/reactions/DHAD1m DHAD1m]
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* [http://bigg.ucsd.edu/universal/reactions/DHAD2m DHAD2m]
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* [http://bigg.ucsd.edu/universal/reactions/DHAD_3mob_h DHAD_3mob_h]
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* [http://bigg.ucsd.edu/universal/reactions/DHADh DHADh]
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* [http://bigg.ucsd.edu/universal/reactions/DMORh DMORh]
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* [http://bigg.ucsd.edu/universal/reactions/ILETAm ILETAm]
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* [http://bigg.ucsd.edu/universal/reactions/IPPSh IPPSh]
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* [http://bigg.ucsd.edu/universal/reactions/IPPSm IPPSm]
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* [http://bigg.ucsd.edu/universal/reactions/KARA1im KARA1im]
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* [http://bigg.ucsd.edu/universal/reactions/KARA2im KARA2im]
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* [http://bigg.ucsd.edu/universal/reactions/KARI KARI]
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* [http://bigg.ucsd.edu/universal/reactions/KARI_23dhmb KARI_23dhmb]
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* [http://bigg.ucsd.edu/universal/reactions/KARI_23dhmp KARI_23dhmp]
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* [http://bigg.ucsd.edu/universal/reactions/KARI_3hmoa KARI_3hmoa]
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* [http://bigg.ucsd.edu/universal/reactions/LEUTAi LEUTAi]
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* [http://bigg.ucsd.edu/universal/reactions/LEUTAm LEUTAm]
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* [http://bigg.ucsd.edu/universal/reactions/OMCDCm OMCDCm]
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* [http://bigg.ucsd.edu/universal/reactions/PPATDh PPATDh]
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* [http://bigg.ucsd.edu/universal/reactions/SERD_L SERD_L]
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* [http://bigg.ucsd.edu/universal/reactions/SER_AL SER_AL]
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* [http://bigg.ucsd.edu/universal/reactions/TAL TAL]
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* [http://bigg.ucsd.edu/universal/reactions/THRAL THRAL]
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* [http://bigg.ucsd.edu/universal/reactions/THRD_Lm THRD_Lm]
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* [http://bigg.ucsd.edu/universal/reactions/VALTAim VALTAim]
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* [http://bigg.ucsd.edu/universal/reactions/VPAMTr VPAMTr]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: common_name=Valine, leucine and isoleucine biosynthesis}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23584 23584]
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{{#set: reaction found=15}}
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* BioCyc : META:DIHYDROFOLATESYNTH-RXN
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{{#set: total reaction=49}}
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* MetaNetX (MNX) Equation : MNXR97403
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{{#set: completion rate=31.0}}
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* KEGG Reaction : R02237
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* EC Number : 6.3.2.12
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Dihydrofolate synthase}}
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{{#set: gene associated=B471_RS0119120}}
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{{#set: in pathway=map01100|map00790}}
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{{#set: reconstruction category=orthology}}
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−
{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=aferrooxidans|bsubtilis}}
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Revision as of 23:49, 20 March 2018

Pathway map00290

  • common_name:
    • Valine, leucine and isoleucine biosynthesis
  • Synonym(s):

Reaction(s) found

15 reactions found over 49 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/cutigem/index.php?title=APRAUR&oldid=4373"