Difference between revisions of "EX met L"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GLYCLTt2r GLYCLTt2r] == * direction: ** REVERSIBLE * common name: ** Glycolate transport via proton...")
 
(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00770 map00770] == * common_name: ** Pantothenate and CoA biosynthesis * Synonym(s): == Reaction(s...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://bigg.ucsd.edu/universal/reactions/GLYCLTt2r GLYCLTt2r] ==
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== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00770 map00770] ==
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* direction:
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* common_name:
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** REVERSIBLE
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** Pantothenate and CoA biosynthesis
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* common name:
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** Glycolate transport via proton symport, reversible
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''20''' reactions found over '''75''' reactions in the full pathway
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** 1.0 [[glyclt]][e] '''+''' 1.0 [[h]][e] '''<=>''' 1.0 [[h]][c] '''+''' 1.0 [[glyclt]][c]
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* [[ACHBS]]
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* With common name(s):
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** 0 associated gene:
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** 1.0 Glycolate C2H3O3[e] '''+''' 1.0 H+[e] '''<=>''' 1.0 H+[c] '''+''' 1.0 Glycolate C2H3O3[c]
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** 1 reconstruction source(s) associated:
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*** [[manual-reaction_to_add_delete]]
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== Genes associated with this reaction  ==
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* [[ACLS]]
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Genes have been associated with this reaction based on different elements listed below.
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** 1 associated gene(s):
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* [[B471_RS0104565]]
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*** [[B471_RS0108550]]
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** [[pantograph]]-[[bsubtilis]]
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** 1 reconstruction source(s) associated:
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== Pathways  ==
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*** [[orthology-cljungdahlii]]
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== Reconstruction information  ==
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* [[ACPS1]]
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* [[orthology]]:
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** 1 associated gene(s):
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** [[pantograph]]:
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*** [[B471_RS0105475]]
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*** [[bsubtilis]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[ASP1DC]]
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** 1 associated gene(s):
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*** [[B471_RS0116125]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[DHAD1]]
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** 1 associated gene(s):
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*** [[B471_RS0117830]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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* [[DHAD2]]
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** 1 associated gene(s):
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*** [[B471_RS0117830]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[DPCOAK]]
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** 1 associated gene(s):
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*** [[B471_RS0118270]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[DPR]]
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** 3 associated gene(s):
 +
*** [[B471_RS24295]]
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*** [[B471_RS22435]]
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*** [[B471_RS0112620]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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* [[DURAD]]
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** 1 associated gene(s):
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*** [[B471_RS0103590]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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* [[ILETA]]
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** 4 associated gene(s):
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*** [[B471_RS0110105]]
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*** [[B471_RS0102340]]
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*** [[B471_RS0106435]]
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*** [[B471_RS0109150]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[KARA1]]
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** 1 associated gene(s):
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*** [[B471_RS0108535]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[KARA2]]
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** 1 associated gene(s):
 +
*** [[B471_RS0108535]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[MOHMT]]
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** 1 associated gene(s):
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*** [[B471_RS0108380]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[PANTS]]
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** 1 associated gene(s):
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*** [[B471_RS0101070]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[PNTK]]
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** 1 associated gene(s):
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*** [[B471_RS0107805]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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* [[PPCDC]]
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** 1 associated gene(s):
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*** [[B471_RS0109325]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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* [[PPNCL]]
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** 1 associated gene(s):
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*** [[B471_RS0109325]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-bsubtilis]]
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* [[PPNCL2]]
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** 1 associated gene(s):
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*** [[B471_RS0109325]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-aferrooxidans]]
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* [[PTPATi]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[manual-reaction_to_add_delete]]
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* [[VALTA]]
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** 4 associated gene(s):
 +
*** [[B471_RS0109150]]
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*** [[B471_RS0110105]]
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*** [[B471_RS0106435]]
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*** [[B471_RS0102340]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-cljungdahlii]]
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*** [[orthology-bsubtilis]]
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*** [[orthology-aferrooxidans]]
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== Reaction(s) not found ==
 +
* [http://bigg.ucsd.edu/universal/reactions/56DH5FLURAAMH 56DH5FLURAAMH]
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* [http://bigg.ucsd.edu/universal/reactions/5FLURAOR 5FLURAOR]
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* [http://bigg.ucsd.edu/universal/reactions/ACAS_2ahbut ACAS_2ahbut]
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* [http://bigg.ucsd.edu/universal/reactions/ACHBSm ACHBSm]
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* [http://bigg.ucsd.edu/universal/reactions/ACLSm ACLSm]
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* [http://bigg.ucsd.edu/universal/reactions/ACPS1_1 ACPS1_1]
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* [http://bigg.ucsd.edu/universal/reactions/ACPS1h ACPS1h]
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* [http://bigg.ucsd.edu/universal/reactions/ACPpds ACPpds]
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* [http://bigg.ucsd.edu/universal/reactions/AFLBURPPAAMH AFLBURPPAAMH]
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* [http://bigg.ucsd.edu/universal/reactions/APCPT APCPT]
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* [http://bigg.ucsd.edu/universal/reactions/APLh APLh]
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* [http://bigg.ucsd.edu/universal/reactions/APLm APLm]
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* [http://bigg.ucsd.edu/universal/reactions/APNPT APNPT]
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* [http://bigg.ucsd.edu/universal/reactions/APPAT APPAT]
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* [http://bigg.ucsd.edu/universal/reactions/BCTA_val_h BCTA_val_h]
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* [http://bigg.ucsd.edu/universal/reactions/BCTAh BCTAh]
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* [http://bigg.ucsd.edu/universal/reactions/BUPN BUPN]
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* [http://bigg.ucsd.edu/universal/reactions/DHAD1m DHAD1m]
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* [http://bigg.ucsd.edu/universal/reactions/DHAD2m DHAD2m]
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* [http://bigg.ucsd.edu/universal/reactions/DHAD_3mob_h DHAD_3mob_h]
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* [http://bigg.ucsd.edu/universal/reactions/DHADh DHADh]
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* [http://bigg.ucsd.edu/universal/reactions/DHPD DHPD]
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* [http://bigg.ucsd.edu/universal/reactions/DHPM1 DHPM1]
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* [http://bigg.ucsd.edu/universal/reactions/DHPM2 DHPM2]
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* [http://bigg.ucsd.edu/universal/reactions/DMORh DMORh]
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* [http://bigg.ucsd.edu/universal/reactions/DNADDP DNADDP]
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* [http://bigg.ucsd.edu/universal/reactions/DPCOAKm DPCOAKm]
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* [http://bigg.ucsd.edu/universal/reactions/DPCOAPP DPCOAPP]
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* [http://bigg.ucsd.edu/universal/reactions/DPRm DPRm]
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* [http://bigg.ucsd.edu/universal/reactions/DURAD2 DURAD2]
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* [http://bigg.ucsd.edu/universal/reactions/DURADx DURADx]
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* [http://bigg.ucsd.edu/universal/reactions/FADDP FADDP]
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* [http://bigg.ucsd.edu/universal/reactions/ILETAm ILETAm]
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* [http://bigg.ucsd.edu/universal/reactions/KARA1im KARA1im]
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* [http://bigg.ucsd.edu/universal/reactions/KARA2im KARA2im]
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* [http://bigg.ucsd.edu/universal/reactions/KARI_23dhmb KARI_23dhmb]
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* [http://bigg.ucsd.edu/universal/reactions/KARI_23dhmp KARI_23dhmp]
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* [http://bigg.ucsd.edu/universal/reactions/MTMOHT MTMOHT]
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* [http://bigg.ucsd.edu/universal/reactions/NADDP NADDP]
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* [http://bigg.ucsd.edu/universal/reactions/NADDPe NADDPe]
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* [http://bigg.ucsd.edu/universal/reactions/NADDPp NADDPp]
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* [http://bigg.ucsd.edu/universal/reactions/NPH NPH]
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* [http://bigg.ucsd.edu/universal/reactions/PBAL PBAL]
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* [http://bigg.ucsd.edu/universal/reactions/PBALm PBALm]
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* [http://bigg.ucsd.edu/universal/reactions/PNCDC PNCDC]
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* [http://bigg.ucsd.edu/universal/reactions/PNORn PNORn]
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* [http://bigg.ucsd.edu/universal/reactions/PNTEH PNTEH]
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* [http://bigg.ucsd.edu/universal/reactions/PNTKm PNTKm]
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* [http://bigg.ucsd.edu/universal/reactions/PPATDh PPATDh]
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* [http://bigg.ucsd.edu/universal/reactions/PPNCL3 PPNCL3]
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* [http://bigg.ucsd.edu/universal/reactions/PTPATim PTPATim]
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* [http://bigg.ucsd.edu/universal/reactions/UDPGP UDPGP]
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* [http://bigg.ucsd.edu/universal/reactions/UDPGPpp UDPGPpp]
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* [http://bigg.ucsd.edu/universal/reactions/UPPN UPPN]
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* [http://bigg.ucsd.edu/universal/reactions/VALTAim VALTAim]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: common_name=Pantothenate and CoA biosynthesis}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29411 29411]
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{{#set: reaction found=20}}
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* MetaNetX (MNX) Equation : MNXR100334
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{{#set: total reaction=75}}
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* BioCyc : META:TRANS-RXN-105
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{{#set: completion rate=27.0}}
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Glycolate transport via proton symport, reversible}}
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{{#set: gene associated=B471_RS0104565}}
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−
{{#set: in pathway=}}
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−
{{#set: reconstruction category=orthology}}
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−
{{#set: reconstruction tool=pantograph}}
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−
{{#set: reconstruction source=bsubtilis}}
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Revision as of 23:49, 20 March 2018

Pathway map00770

  • common_name:
    • Pantothenate and CoA biosynthesis
  • Synonym(s):

Reaction(s) found

20 reactions found over 75 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/cutigem/index.php?title=EX_met_L&oldid=4375"