Difference between revisions of "UPP3MT 2"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/HEMEOS HEMEOS] == * direction: ** LEFT-TO-RIGHT * common name: ** Heme O synthase * Synonym(s): ==...")
 
(Created page with "Category:Pathway == Pathway [http://www.genome.jp/dbget-bin/www_bget?map00332 map00332] == * common_name: ** Carbapenem biosynthesis * Synonym(s): == Reaction(s) found ==...")
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/HEMEOS HEMEOS] ==
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== Pathway [http://www.genome.jp/dbget-bin/www_bget?map00332 map00332] ==
* direction:
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* common_name:
** LEFT-TO-RIGHT
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** Carbapenem biosynthesis
* common name:
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** Heme O synthase
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* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''3''' reactions found over '''14''' reactions in the full pathway
** 1.0 [[h2o]][c] '''+''' 1.0 [[frdp]][c] '''+''' 1.0 [[pheme]][c] '''=>''' 1.0 [[hemeO]][c] '''+''' 1.0 [[ppi]][c]
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* [[G5SADs]]
* With common name(s):
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** 0 associated gene:
** 1.0 H2O H2O[c] '''+''' 1.0 Farnesyl diphosphate[c] '''+''' 1.0 Protoheme C34H30FeN4O4[c] '''=>''' 1.0 Heme O C49H56FeN4O5[c] '''+''' 1.0 Diphosphate[c]
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** 1 reconstruction source(s) associated:
 
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*** [[manual-reaction_to_add_delete]]
== Genes associated with this reaction  ==
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* [[G5SD]]
Genes have been associated with this reaction based on different elements listed below.
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** 1 associated gene(s):
* [[B471_RS0118070]]
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*** [[B471_RS0101260]]
** [[pantograph]]-[[aferrooxidans]]
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** 3 reconstruction source(s) associated:
== Pathways  ==
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*** [[orthology-cljungdahlii]]
* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
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*** [[orthology-bsubtilis]]
** '''472''' reactions found over '''2349''' reactions in the full pathway
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*** [[orthology-aferrooxidans]]
* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
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* [[GLU5K]]
** '''212''' reactions found over '''1054''' reactions in the full pathway
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** 1 associated gene(s):
* [[map00860]]: [http://www.genome.jp/dbget-bin/www_bget?map00860 map00860]
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*** [[B471_RS0101265]]
** '''23''' reactions found over '''106''' reactions in the full pathway
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** 3 reconstruction source(s) associated:
== Reconstruction information  ==
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*** [[orthology-cljungdahlii]]
* [[orthology]]:
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*** [[orthology-bsubtilis]]
** [[pantograph]]:
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*** [[orthology-aferrooxidans]]
*** [[aferrooxidans]]
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== Reaction(s) not found ==
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* [http://bigg.ucsd.edu/universal/reactions/ACPS ACPS]
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* [http://bigg.ucsd.edu/universal/reactions/ACPSm ACPSm]
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* [http://bigg.ucsd.edu/universal/reactions/COAHLp COAHLp]
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* [http://bigg.ucsd.edu/universal/reactions/G5DHx G5DHx]
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* [http://bigg.ucsd.edu/universal/reactions/G5SADrm G5SADrm]
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* [http://bigg.ucsd.edu/universal/reactions/G5SD2 G5SD2]
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* [http://bigg.ucsd.edu/universal/reactions/G5SDym G5SDym]
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* [http://bigg.ucsd.edu/universal/reactions/GLU5Km GLU5Km]
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* [http://bigg.ucsd.edu/universal/reactions/PAN4PP PAN4PP]
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* [http://bigg.ucsd.edu/universal/reactions/PROD2 PROD2]
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* [http://bigg.ucsd.edu/universal/reactions/PROD2m PROD2m]
 
== External links  ==
 
== External links  ==
* RHEA:
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{{#set: common_name=Carbapenem biosynthesis}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28070 28070]
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{{#set: reaction found=3}}
* Reactome : REACT_R-ATH-2995330
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{{#set: total reaction=14}}
* MetaNetX (MNX) Equation : MNXR100596
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{{#set: completion rate=21.0}}
* KEGG Reaction : R07411
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* EC Number : 2.5.1.-
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Heme O synthase}}
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{{#set: gene associated=B471_RS0118070}}
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{{#set: in pathway=map01100|map01110|map00860}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=aferrooxidans}}
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Revision as of 23:49, 20 March 2018

Pathway map00332

  • common_name:
    • Carbapenem biosynthesis
  • Synonym(s):

Reaction(s) found

3 reactions found over 14 reactions in the full pathway

Reaction(s) not found

External links