Difference between revisions of "QOX"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/ALAALAr ALAALAr] == * direction: ** REVERSIBLE * common name: ** D-alanine-D-alanine ligase (revers...")
 
(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/ni2 ni2] == * common name: ** Nickel * Synonym(s): == Reaction(s) known to consume the compo...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/ALAALAr ALAALAr] ==
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== Metabolite [http://bigg.ucsd.edu/universal/metabolites/ni2 ni2] ==
* direction:
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** REVERSIBLE
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* common name:
 
* common name:
** D-alanine-D-alanine ligase (reversible)
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** Nickel
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
* With identifiers:
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* [[NIabc]]
** 2.0 [[ala__D]][c] '''+''' 1.0 [[atp]][c] '''<=>''' 1.0 [[h]][c] '''+''' 1.0 [[alaala]][c] '''+''' 1.0 [[adp]][c] '''+''' 1.0 [[pi]][c]
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* [[BIOMASS]]
* With common name(s):
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== Reaction(s) known to produce the compound ==
** 2.0 D-Alanine[c] '''+''' 1.0 ATP C10H12N5O13P3[c] '''<=>''' 1.0 H+[c] '''+''' 1.0 D-Alanyl-D-alanine[c] '''+''' 1.0 ADP C10H12N5O10P2[c] '''+''' 1.0 Phosphate[c]
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* [[NIabc]]
 
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== Reaction(s) of unknown directionality ==
== Genes associated with this reaction  ==
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* [[EX_ni2]]
Genes have been associated with this reaction based on different elements listed below.
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* [[B471_RS0112130]]
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** [[pantograph]]-[[cljungdahlii]]
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** [[pantograph]]-[[bsubtilis]]
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** [[pantograph]]-[[aferrooxidans]]
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== Pathways  ==
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
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** '''472''' reactions found over '''2349''' reactions in the full pathway
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* [[map00473]]: [http://www.genome.jp/dbget-bin/www_bget?map00473 map00473]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[map00550]]: [http://www.genome.jp/dbget-bin/www_bget?map00550 map00550]
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** '''14''' reactions found over '''27''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[aferrooxidans]]
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*** [[cljungdahlii]]
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*** [[bsubtilis]]
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== External links  ==
 
== External links  ==
* RHEA:
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{{#set: common name=Nickel}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11224 11224]
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{{#set: consumed by=NIabc|BIOMASS}}
* BioCyc : META:DALADALALIG-RXN
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{{#set: produced by=NIabc}}
* MetaNetX (MNX) Equation : MNXR95678
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{{#set: reversible reaction associated=EX_ni2}}
* KEGG Reaction : R01150
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* EC Number : 6.3.2.4
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=D-alanine-D-alanine ligase (reversible)}}
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{{#set: gene associated=B471_RS0112130}}
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{{#set: in pathway=map01100|map00473|map00550}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=aferrooxidans|cljungdahlii|bsubtilis}}
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Revision as of 00:02, 21 March 2018

Metabolite ni2

  • common name:
    • Nickel
  • Synonym(s):

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links