Difference between revisions of "Pap"

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(Created page with "Category:Reaction == Reaction [http://bigg.ucsd.edu/universal/reactions/GLUSy GLUSy] == * direction: ** LEFT-TO-RIGHT * common name: ** Glutamate synthase (NADPH) * Synony...")
(Created page with "Category:Metabolite == Metabolite [http://bigg.ucsd.edu/universal/metabolites/pap pap] == * common name: ** Adenosine 3',5'-bisphosphate * Synonym(s): == Reaction(s) know...")
 
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[[Category:Reaction]]
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[[Category:Metabolite]]
== Reaction [http://bigg.ucsd.edu/universal/reactions/GLUSy GLUSy] ==
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== Metabolite [http://bigg.ucsd.edu/universal/metabolites/pap pap] ==
* direction:
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** LEFT-TO-RIGHT
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* common name:
 
* common name:
** Glutamate synthase (NADPH)
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** Adenosine 3',5'-bisphosphate
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
* With identifiers:
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* [[BPNT]]
** 1.0 [[nadph]][c] '''+''' 1.0 [[akg]][c] '''+''' 1.0 [[h]][c] '''+''' 1.0 [[gln__L]][c] '''=>''' 2.0 [[glu__L]][c] '''+''' 1.0 [[nadp]][c]
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== Reaction(s) known to produce the compound ==
* With common name(s):
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* [[ACPS1]]
** 1.0 Nicotinamide adenine dinucleotide phosphate - reduced[c] '''+''' 1.0 2-Oxoglutarate[c] '''+''' 1.0 H+[c] '''+''' 1.0 L-Glutamine[c] '''=>''' 2.0 L-Glutamate[c] '''+''' 1.0 Nicotinamide adenine dinucleotide phosphate[c]
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== Reaction(s) of unknown directionality ==
 
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* [[PAPSR_CUT]]
== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[B471_RS0109970]]
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** [[pantograph]]-[[cljungdahlii]]
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** [[pantograph]]-[[bsubtilis]]
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** [[pantograph]]-[[aferrooxidans]]
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* [[B471_RS0105685]]
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** [[pantograph]]-[[cljungdahlii]]
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* [[B471_RS0115910]]
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** [[pantograph]]-[[cljungdahlii]]
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* [[B471_RS0103585]]
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** [[pantograph]]-[[bsubtilis]]
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** [[pantograph]]-[[aferrooxidans]]
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== Pathways  ==
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* [[map01100]]: [http://www.genome.jp/dbget-bin/www_bget?map01100 map01100]
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** '''471''' reactions found over '''2349''' reactions in the full pathway
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* [[map01110]]: [http://www.genome.jp/dbget-bin/www_bget?map01110 map01110]
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** '''212''' reactions found over '''1054''' reactions in the full pathway
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* [[map01120]]: [http://www.genome.jp/dbget-bin/www_bget?map01120 map01120]
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** '''101''' reactions found over '''715''' reactions in the full pathway
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* [[map00910]]: [http://www.genome.jp/dbget-bin/www_bget?map00910 map00910]
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** '''5''' reactions found over '''36''' reactions in the full pathway
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* [[map01230]]: [http://www.genome.jp/dbget-bin/www_bget?map01230 map01230]
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** '''78''' reactions found over '''228''' reactions in the full pathway
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* [[map00250]]: [http://www.genome.jp/dbget-bin/www_bget?map00250 map00250]
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** '''22''' reactions found over '''93''' reactions in the full pathway
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* [[map01130]]: [http://www.genome.jp/dbget-bin/www_bget?map01130 map01130]
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** '''148''' reactions found over '''694''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-cljungdahlii]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-bsubtilis]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-aferrooxidans]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-reaction_to_add_delete]]
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*** Comment: [[reaction added from literature evidence or biological expertise]]
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== External links  ==
 
== External links  ==
* RHEA:
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{{#set: common name=Adenosine 3',5'-bisphosphate}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15501 15501]
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{{#set: consumed by=BPNT}}
* EC Number : 1.4.1.13
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{{#set: produced by=ACPS1}}
* MetaNetX (MNX) Equation : MNXR100291
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{{#set: reversible reaction associated=PAPSR_CUT}}
* KEGG Reaction : R00114
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* BioCyc : META:GLUTAMATESYN-RXN
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Glutamate synthase (NADPH)}}
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{{#set: gene associated=B471_RS0109970|B471_RS0105685|B471_RS0115910|B471_RS0103585}}
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{{#set: in pathway=map01100|map01110|map01120|map00910|map01230|map00250|map01130}}
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{{#set: reconstruction category=orthology|manual}}
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{{#set: reconstruction source=orthology-cljungdahlii|orthology-bsubtilis|orthology-aferrooxidans|manual-reaction_to_add_delete}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction comment=reaction added from literature evidence or biological expertise}}
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Latest revision as of 16:26, 21 March 2018

Metabolite pap

  • common name:
    • Adenosine 3',5'-bisphosphate
  • Synonym(s):

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links